1. Browse the Database
  2. View Redoxidase
Entry information : TpsGPx03
Entry ID 2883
Creation 2008-08-14 (Christophe Dunand)
Last sequence changes 2008-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Michele Oliva
Last annotation changes 2008-08-14 (Christophe Dunand)
Peroxidase information: TpsGPx03
Name TpsGPx03
Class Plant glutathione peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Bacillariophyta Coscinodiscophyceae Thalassiosiraceae Thalassiosira
Organism Thalassiosira pseudonana    [TaxId: 35128 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TpsGPx03
start..stop		 S start..stop
SbGPx05 132 7.92e-38 132..283 43..201
ThasGPx02 127 2.05e-36 132..285 6..166
PtGPx02 127 2.27e-36 132..283 6..164
LeGPx02 127 2.96e-36 132..283 6..164
Literature and cross-references TpsGPx03
Literature Richardson,P., Lucas,S., Rokhsar,D., Wang,M. and Lindquist,E.A. DOE Joint Genome Institute Thalassiosira pseudonana EST project Unpublished (2007).
DNA ref. JGI genome:   chr_3 (28182..29075)
EST ref. GenBank:   FC536701.1 [5' end]  FC519243.1 [3' end]
Cluster/Prediction ref. JGI gene:   171820 [Fragment]
Protein sequence: TpsGPx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   298
PWM (Da):   %s   33195.93 Transmb domain:   %s   i55-74o
PI (pH):   %s   9.25
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRFLQSLSSI MRRFNKPSTA GRLSHLDLPS SNDNDDEGST KIHKRKQQRS SNTKAIAVTF VCALIALGTL FFVADKVRTD GEIYAKTPNG SILVGSKKKE ASVVGGSDGG SSSSISNEQQ  RFLSQQNRLL PPDSIYRSNI MDIHGNQQQL MKYAGSISLI VNVACExGLT KSNYKELAVL YDKYHKRGLN VLAFPSNDFH QEKETNEEIL EYVRSNFPEV RFPLFSRAPL ASNLVFQLCE 
KHTGESVAWN FHKYLVDGEG RAVKSYGHRV QPMDMEGDIV RLLEENEAKR VQQVPQTY 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, no intron) and 5 ESTs.