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Entry information : PtGPx05 (POPTR_0014s13490 / Potri.014G138800)
Entry ID 2888
Creation 2006-03-20 (Felipe Teixeira)
Last sequence changes 2006-03-20 (Felipe Teixeira)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-03-08 (Qiang Li)
Peroxidase information: PtGPx05 (POPTR_0014s13490 / Potri.014G138800)
Name (synonym) PtGPx05 (POPTR_0014s13490 / Potri.014G138800)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtGPx05
start..stop		 S start..stop
EgrGPx09 295 2.15e-104 1..169 1..169
EguGPx09 293 1.73e-103 1..169 1..169
GhGPx05 290 3.82e-102 1..168 1..168
GaGPx05 288 7.96e-102 1..168 1..168
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '2888' 'join(10612443..10612496,10612600..10612676,10612768..10612829,10612943..10613061,10615070..10615237,10615329..10615361)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 10612443..10612496 52 N° 2 10612600..10612676 75 N° 3 10612768..10612829 60 N° 4 10612943..10613061 117
N° 5 10615070..10615237 166 N° 6 10615329..10615361 31  
join(10612443..10612496,10612600..10612676,10612768..10612829,10612943..10613061 ,10615070..10615237,10615329..10615361)


exon

Literature and cross-references PtGPx05 (POPTR_0014s13490 / Potri.014G138800)
Literature JGI.
DNA ref. Phytozome 12:   Chr14 (10612443..10615361)
EST ref. GenBank:   DT476192
Cluster/Prediction ref. JGI gene:   731984 UniGene:   Pth.1708
Omic ref. ePlant:   Potri.014G138800
Protein sequence: PtGPx05 (POPTR_0014s13490 / Potri.014G138800)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   170 (313)
PWM (Da):   %s   18833.66 (34801.6)  
PI (pH):   %s   9.65 (9.03) Peptide Signal:   %s   cut: 24 range:24-336
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSSPSVPEKSIHEFTVKDNRGQDVNLGIYKGKVLLVVNVASKCGFTDSNYTQLTDLYKNYKDGLEILAFPCNQFLNQEPGTSEDAQNFACTRYKADYPIFHVRVNGPNAAPVYKFLKASKPGFLGNRIKWNFTKFLVDKDGHVL
GRYSTITAPMAIEADIKKALGEM*

Retrieve as FASTA  
Remarks Complete sequence from genomic (4 introns) and 24 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGTCTTCTCCATCGGTACCAGAGAAATCAATCCATGAATTCACTGTCAAGAGGTAATAAAATAAAATATTATGTTTATAGATTGATTGATTGCTTGTTGATTCATGGGTTTCTTTT
TAAAAAATAATAATAAATTTTGATGTGAATTACTTTCAGGATAACAGAGGTCAGGACGTGAACCTTGGTATCTATAAAGGGAAGGTTCTTCTTGTGGTTAACGTCGCCTCTAAATGTGGT
TTGTTTTTGTTTCTTTTTTGTTCTTCGTCTTCTAGGGAATGGAATTACTCGAAACTTCATTATTGATTTCTTCTTGTTGTTTGGAACAGTGGATTTACAGATTCAAATTACACCCAGTTG
ACTGATCTTTATAAAAATTACAAGGACAAAGAGGTTTGTGTTTCTAAATTAATGCTATGTTTTCACCCAGATTTTTTTTTTGTGTGGAGAAAGCTGCTGTGATGAAAAATAAAATAAAAT
GATTTAATGTCTTGTGATGCTGTCAGGTTTGGAAATCTTGGCGTTTCCATGTAACCAGTTTTTGAATCAAGAGCCTGGGACAAGCGAGGATGCTCAAAACTTTGCTTGTACTAGGTACAA
GGCTGACTATCCAATTTTCCACAAGAGGTAATGAATGGACTTGGACTTGTTATTGCAGTAGGATGTTATCTCCTCCATAGTTGTTCTCGACATTTCACCCCTTCTAGTTTGCCAAATGTC
CATTTCGCTCCATGCAGTTGCCATGTCCTTGTGTTAAGCGCATTGTTGCAGTTACAATCCACCCAGTTTAATTTCTAACAGGCCTAAATGGAGCCCTTTTTTTATATTTAATTTTCCTAT
TTATCCCCAAAAGAAGATTTGTTGTGGCCAACATGGCTAATCGTTATTTCTCCCACAACAGTGGTGCCGTAGGTTCATTGGCTATTTAAATGCATGGGTTGACATTAGACCAGAGGGACC
GGAGTGGAACATTTGGCACTATATTCTCCAAATTTTTAGCTAGTCTTTTGCATTATGTTGCTACTTGTTGATCAACGAAGGTAGTTAATGCTGCCTTCTAAGTTGATCTCAAGTGCCTGT
GATTATCTTCTATCTGGTTATAAGATGATGCTAGAAGTTCATTCATTTCTGTAAAAGATTGTTATAACTCTTTTTTACCAATGCATTCTCTCTTAGGTTAAGTTATTTTGCTTCCTAGAA
ATTACTGTTTATGCGATTGATTGTAGCTGGTTTAGCTATCTATTGAGAGTTAATGAAGATCTATGAATTCCATATAGATCAGAGGCAAGCTTAGCAAACACTACTTTTTCATACCACTAC
AGAGGTAGAAGGTCTTTAACTTTCTCTACCACTAAGGCCATTATGAAAGACTTAGGAATCACTGTTTTTCATAAGGAGACGCTGACGACTCTAGACTGCAGGGGCGCATGGTATTGTTTG
ATGTGGAAGCGCCTGTCCCAGTATTAGCAGATTGAATGTGAGCCTAGAGTCTAAATGCATTAGAAATGGGGTTGGCCAGTGGCCAATGATGAAGAGATATTGATTTGGAAGTGAATTGGT
CAATTCTGCTACTTCCTTGTTGGGAAGCACCCTTGAGAGGTTCTGTGGGAGGCAAGTGGCCATATGTTTGATTGGAGAGCTGAGAGCTGATTCACCCAAGAAACAAGCATTTTATTTTTA
TTTTTAATGATATTTTCAATAGGGGTATTTCTGAATTCCCGACTTCATCCCATGCACTGAATTGGATGGCCCTTGGTTGGCATTTATTGGGACATGGAAACCTTTTACAGTGTATAGGTT
GCAAATTAAATTGATCACGGAACTTCTGCCTGCATTTGTTTACCATTTGAGAAAAATGGGCTGGTAATGGAAGGGGTTTAAAGCTGAACTGCTGCACTTACATCCTTGTCATGTTTTGGT
TCTTTGAGAGGCGCAAAGATATGTGGTCTACAATACTCCATCAAGTGACAAAAAGTGGAACTGAAAATATTGGGAAATACTTGTTTTGACACTTTAAATTAGACATACATAGATGTTTAA
TCAGTAATTAGATTTTTTTTTTCTCCTGAAGTTCGGTGAATTCAAGATTTGTACAAGGGTCATGTTAAGAAATTAGGAGCATGTTTTTATTGTATAGGCTGTTAATCTTTGTCAATATCA
GAAGTTACAAGGGTTAGTATAGTAGCAATTTACAGTTATCTAGAATCGCTAGAATGTGTAGGATGCAGTAAAAGACGACAAATTCAAAAAGGAAAATGAATATGCTAGTTGAAGTAGAAT
TCATGGATTGTGTTGGGTATAGTAGCAATTTACAGTTATCTAGAATTGCTAGAATGTGTAGGATGCAGTAAAAGACGACAAATTCAAAAAGGAAAATGAATATGCTAGTTGAAGTAGAAT
TCATGGATTGTGTTGGCATTCAAGAAGTCCATTTCTGATTTTATAAGATTTTAAACCTGATGTCTAAGTGATTGCTTGTCAATCATCATATTTGTGAGAGATACTTAACTGTGCTTTTCA
TGTGACCATAAATTATACAGCTTACCAACTATGGATCTTCAGTTAGAAGTAGTTGATTTTGCTCTTTGGAACGTACTTATTTAATACTAGATTCTCAACTCTCTGCTGCATCTAGGTTCG
TGTTAATGGACCAAATGCTGCACCTGTATACAAGTTCCTCAAGGCAAGTAAACCTGGATTTCTGGGAAATAGGATAAAGTGGAATTTTACCAAGTTCTTGGTTGACAAGGACGGGCATGT
CCTTGGTCGCTATAGCACAATCACTGCTCCTATGGCCATTGAGAGGTTCCTCCCTCCCTCCCTCCCTCCCTCTCTCTCTAGCAAACATGTTATTCATAAAATTCACACTCAGTTTTGCTT
TGTTTTTTGGGAACAGGCTGATATCAAGAAAGCACTGGGAGAGATGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGTCTTCTCCATCGGTACCAGAGAAATCAATCCATGAATTCACTGTCAAGGATAACAGAGGTCAGGACGTGAACCTTGGTATCTATAAAGGGAAGGTTCTTCTTGTGGTTAACGTC
GCCTCTAAATGTGGATTTACAGATTCAAATTACACCCAGTTGACTGATCTTTATAAAAATTACAAGGACAAAGGTTTGGAAATCTTGGCGTTTCCATGTAACCAGTTTTTGAATCAAGAG
CCTGGGACAAGCGAGGATGCTCAAAACTTTGCTTGTACTAGGTACAAGGCTGACTATCCAATTTTCCACAAGGTTCGTGTTAATGGACCAAATGCTGCACCTGTATACAAGTTCCTCAAG
GCAAGTAAACCTGGATTTCTGGGAAATAGGATAAAGTGGAATTTTACCAAGTTCTTGGTTGACAAGGACGGGCATGTCCTTGGTCGCTATAGCACAATCACTGCTCCTATGGCCATTGAG
GCTGATATCAAGAAAGCACTGGGAGAGATGTGA

Retrieve as FASTA