Entry information : RoCcP01 (RhizopCcP1)
| Entry ID | 2893 |
|---|---|
| Creation | 2007-01-17 (Marcel Zamocky) |
| Last sequence changes | 2007-01-17 (Marcel Zamocky) |
| Sequence status | complete |
| Reviewer | Filippo Passardi |
| Last annotation changes | 2012-05-07 (Catherine Mathe (Scipio)) |
Peroxidase information: RoCcP01 (RhizopCcP1)
| Name (synonym) | RoCcP01 (RhizopCcP1) | ||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class | Cytochrome C peroxidase [Orthogroup: CcP012] | ||||||||||||||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Fungi Mucoraceae Rhizopus | ||||||||||||||||||||||||||||||||||||||||||||||||
| Organism | Rhizopus oryzae [TaxId: 64495 ] | ||||||||||||||||||||||||||||||||||||||||||||||||
| Cellular localisation | Mitochondria |
||||||||||||||||||||||||||||||||||||||||||||||||
| Tissue type | N/D |
||||||||||||||||||||||||||||||||||||||||||||||||
| Inducer | N/D |
||||||||||||||||||||||||||||||||||||||||||||||||
| Repressor | N/D |
||||||||||||||||||||||||||||||||||||||||||||||||
| Best BLASTp hits |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '2893' 'complement(join(1506539..1506934,1506988..1507113,1507168..1507420,1507477..1507696,1507780..1507843,1507898..1507936))' |
Exons►
|
||||||||||||||||||||||||||||||||||||||||||||||||
Literature and cross-references RoCcP01 (RhizopCcP1)
| Literature | Zamocky M. and Dunand C. (2006) Divergent evolutionary lines of cytochrome c peroxidases belonging to the superfamily of bacterial, fungal and plant heme peroxidases. FEBS Letters 580:6655-6664
Lander,E., Birren,B., Ma,L.J., Ibrahim,A., Skory,C., Wickes,B. and Lang,F.The Genome Sequence of Rhizopus oryzae RA 99-880, Unpublished |
|---|---|
| DNA ref. | JGI genome: supercontig_3.7 (1507936..1506539) |
Protein sequence: RoCcP01 (RhizopCcP1)
| Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
| Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
| Remarks | Complete sequence from genomic. 6 exons predicted with Softberry (reverse chain): 396957-397352, 397406-397531, 397586-397837, 397897-398112, 398199-398261, 398316-398354. Signal peptide predicted for transport in mitochondrion (reliability class 2 Marcel). Strain ="RA 99-880" | ||||||||||||
| DNA ► Send to BLAST |
|
||||||||||||
| CDS► Send to BLAST |
|
||||||||||||
