Entry information : ThPrx21
Entry ID 2909
Creation 2006-03-22 (Christophe Dunand)
Last sequence changes 2015-11-12 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-12 (Achraf Jemmat)
Peroxidase information: ThPrx21
Name ThPrx21
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Thellungiella
Organism Thellungiella halophila (Eutrema halophilum)    [TaxId: 98038 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ThPrx21
start..stop
S start..stop
TsPrx21 685 0 1..328 1..328
BstrPrx19 649 0 4..328 3..327
AlyPrx21 642 0 1..328 1..327
BnPrx21-2_other 637 0 1..328 1..328
Literature and cross-references ThPrx21
Literature Taji,T., Sakurai,T., Mochida,K., Ishiwata,A., Kurotani,A.,Totoki,Y., Toyoda,A., Sakaki,Y., Seki,M., Ono,H., Sakata,Y., Tanaka,S. and Shinozaki,K. Large-scale collection and annotation of full-length enriched cDNAs from a model halophyte, Thellungiella halophila. BMC Plant Biol. 8, 115 (2008)
mRNA ref. GenBank:   AK353472.1
Protein sequence: ThPrx21
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (299)
PWM (Da):   %s   36611.39 (33398.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.2 (6.71) Peptide Signal:   %s   cut: 30 range:30-328
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAIAKKPFCL LAFFCLLLQL FSTFHTGNGE LEMNYYRESC PKAEEIIRQQ VETLYYKHGN TAVSWLRNLF HDCVVKSCDA SLLLETARGV ESEQKSTRSF GMRNFKYVKT IKDALEKACP  NTVSCADIVA LSARDGIVML KGPKIEMIKT GRRDSRGSYL GDVETLIPNH NDSLSSVLST FNSIGIDVEA TVALLGAHSV GRVHCVNLVH RLYPTIDPTL DPSYALYLKN RCPTPNPDPN 
AVLYSRNDRE TPMVVDNMYY KNIMAHKGLL VIDDELASDP RTAPFVAKMA SDNSYFHEQF SRGVTLLSET NPLTGDQGEI RKDCRYVN 

Retrieve as FASTA  
Remarks Complete sequence from mRNA.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCATTG CGAAGAAGCC TTTCTGCCTT TTGGCCTTCT TTTGTCTGTT ATTACAGTTA TTCTCTACCT TCCATACCGG AAATGGGGAG CTGGAGATGA ATTATTACAG AGAGAGTTGT  CCAAAAGCGG AAGAGATAAT AAGACAACAA GTGGAGACTC TTTACTACAA ACACGGCAAC ACCGCCGTTT CTTGGCTCCG TAATCTCTTC CATGACTGTG TCGTCAAGTC ATGTGATGCG  TCGCTGTTGC TAGAGACAGC AAGAGGTGTG GAATCTGAGC AAAAATCGAC GAGGAGTTTT GGGATGAGAA ACTTTAAGTA TGTTAAGACT ATCAAAGACG CACTCGAGAA AGCGTGTCCG  AACACAGTGT CTTGTGCCGA TATTGTCGCT CTCTCTGCTA GAGATGGTAT TGTCATGTTG AAAGGGCCAA AAATAGAGAT GATAAAGACA GGAAGGAGAG ATAGCAGAGG GAGCTACTTG  GGAGATGTTG AGACTCTAAT TCCTAACCAC AATGACTCCC TCTCCTCTGT TCTCTCAACT TTCAACTCTA TCGGCATCGA TGTCGAAGCC ACCGTCGCTC TCTTAGGTGC TCACTCAGTG  GGTAGGGTCC ACTGCGTTAA CCTAGTGCAC CGGCTATACC CAACGATCGA CCCGACCCTC GACCCAAGTT ACGCCCTTTA CTTGAAAAAT CGTTGCCCAA CTCCAAACCC GGATCCGAAC  GCCGTCTTGT ACTCCCGCAA CGACCGTGAG ACTCCGATGG TTGTTGACAA CATGTATTAC AAGAACATCA TGGCTCATAA GGGTCTCCTT GTCATCGATG ACGAGCTAGC CTCTGATCCT  AGGACCGCTC CTTTTGTGGC TAAGATGGCT TCCGACAATT CTTACTTCCA TGAGCAGTTC TCACGCGGTG TCACGCTCTT GTCCGAGACC AACCCGCTCA CTGGAGACCA AGGGGAGATC 
AGGAAGGATT GTCGTTATGT GAACTAA 

Retrieve as FASTA