Entry information : NtGPx08-1B (NtGPx08b)
Entry ID 2993
Creation 2006-04-25 (Marcia Pinheiro Margis)
Last sequence changes 2011-04-26 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-26 (Christophe Dunand)
Peroxidase information: NtGPx08-1B (NtGPx08b)
Name (synonym) NtGPx08-1B (NtGPx08b)
Class Plant glutathione peroxidase     [Orthogroup: Gpx2003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer Hormon treatment
Repressor N/D
Best BLASTp hits
Perox score E-value NtGPx08-1B
start..stop
S start..stop
NtGPx08-1A 308 6.39e-110 1..157 14..170
LeGPx08 288 5.01e-102 1..157 14..170
StGPx08 286 3.38e-101 1..157 14..170
PtGPx08 282 1.89e-99 1..156 14..169
Literature and cross-references NtGPx08-1B (NtGPx08b)
Literature Galis,I., Horiguchi,T. and Matsuoka,K. Profiling gene expression in tobacco BY-2 cells under different hormone conditions. Unpublished (2004)
EST ref. GenBank:   BP530262.1
Protein sequence: NtGPx08-1B (NtGPx08b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   157 (303)
PWM (Da):   %s   17701.97 (33198.8)  
PI (pH):   %s   4.66 (6.85) Peptide Signal:   %s   cut: 23 range:23-325
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
DFTVKDSKGN DIYLSSYKGK VLLIVNVASK CGVTNPNYAE LNQLYAKYKD QGLEILAFPC NQFGEEEPGS NDQILDFVCT RFKSEFPIFD KIEVNGENAS PLYKFLKSGK WGIFGDDIQW 
NFAKFLVDKN GQAADRYYPT TSPLTIERDI IKLLEIV 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 5' end is missing. cultivar="Bright Yellow No.2"
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCAGAATCTG TTTTTGACTT CACTGTAAAG GATTCAAAGG GAAATGATAT ATATCTTAGT AGCTACAAAG GAAAGGTCCT ACTTATCGTG AATGTTGCTT CAAAGTGCGG GGTGACTAAC  CCAAACTACG CAGAACTCAA CCAATTATAT GCGAAGTACA AAGATCAAGG CCTGGAAATA TTGGCATTTC CTTGCAATCA ATTTGGCGAG GAAGAACCAG GGAGCAATGA TCAGATCTTA  GACTTCGTTT GTACACGTTT CAAGTCAGAG TTCCCTATAT TTGACAAGAT TGAAGTGAAT GGTGAAAATG CATCTCCTCT TTATAAGTTC TTGAAATCGG GAAAGTGGGG AATATTTGGG  GATGATATTC AGTGGAATTT TGCTAAGTTC CTGGTTGATA AGAATGGACA GGCTGCTGAT CGCTATTATC CTACCACCTC TCCTCTGACA ATTGAGAGGG ATATAATAAA GCTGCTGGAA  ATTGTGTAGT TGCCAAGGTT GAGCCTTCAC CGATGGGTAT CAATTTTTGA CTTGTTAATG CTCTGGCTTG GTTTTGTTGT AGTAGTTTGT CCCTTATTTT CATTTGGTGA TCTGATAACA 
GAACTTGTAT GTTCTTTTGG AGAAATTTAA ACCGACTTAT TTATTACCAA AAAAAAAGAA CAAACAAAAA AAA 

Retrieve as FASTA