The peroxidases and oxidases database
Entry information : BoPrx47-1Ca_other
Entry ID 3001
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx47-1Ca_other
Name BoPrx47-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx028]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx47-1Ca_other
start..stop		 S start..stop
BrPrx47-1Aa_other 550 0 1..271 44..314
AtPrx47 496 8e-180 1..271 55..325
CrubPrx54 495 2e-179 1..271 55..325
AlyPrx47 495 2e-179 1..271 55..325
Literature and cross-references BoPrx47-1Ca_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BZ451134 [3' end]
EST ref. GenBank:   AM062148 [3' end]
Protein sequence: BoPrx47-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   271 (321)
PWM (Da):   %s   29336.21 (35782.9)  
PI (pH):   %s   5.36 (6.51) Peptide Signal:   %s   cut: 30 range:30-350
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
NSxDNALRAD PTLAAGLIRM LFHDCFIEGC DASILLDSTK DNTAEKDSPA NLSLRGYEII DDAKAEIENT CPGVVSCADI IAMAARDAVF WAGGPYYQIA NGRFDGKRSK IEDTRNLPSP  FLNASQLIQT FGQRGFSVRD VVALSGAHTL GVARCSSFKD RLTTPDSTMD SSFAKTLSKT CSAGDNTEQP FDxxRNDFDN AYFNALQRKS GVLFSDQTLF NSPMTRNLVN GYAFNQAMFF 
FHFQQAMQKM SDLNVKPGSQ GEVRQNCRSL N 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 1 GSS (BZ451134). PS is missing. Variety="alboglabra".