Entry information : BoPrx39_other
Entry ID 3002
Creation 2006-05-04 (Christophe Dunand)
Last sequence changes 2006-05-04 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2006-05-04 (Filippo Passardi)
Peroxidase information: BoPrx39_other
Name BoPrx39_other
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx39_other
start..stop
S start..stop
BrPrx39-1A_other 417 8e-150 1..204 1..204
TsPrx39 392 1e-139 1..204 1..204
AtPrx39 380 4e-135 1..204 1..204
BstrPrx83 379 1e-134 1..204 1..204
Literature and cross-references BoPrx39_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B. , Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA sequence http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=18778596&dopt=GenBank
DNA ref. GenBank:   75972281
Protein sequence: BoPrx39_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   211 (188)
PWM (Da):   %s   22583.8 (20120.4) Transmb domain:   %s   o4-21i
PI (pH):   %s   8.14 (8.14) Peptide Signal:   %s   cut: 24 range:24-211
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MARFGLVFVT ILVILGLVSF SEAQLKLGFY DKTCPNAEKI VQAVVNQHIR NVPSLAAGLI RMHFHDCFVR GCDGSILINA TSSNQQVEKV APPNLTVRGF DFIDLVKTVL ERKCPGVVSC 
ADIITLATRD SVAAIGGPTW NVPTGRRDGR ISNATEALNN IPPPFGNFTT LITLFGNQGL DVKDLVLLSG AHTIGVSHCS SFSNVSSLYR R 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 2 GSS (BH508958, BH701182), 3 introns. 3' end is missing. var. alboglabra