The peroxidases and oxidases database
Entry information : BoPrx25_other
Entry ID 3005
Creation 2006-05-05 (Christophe Dunand)
Last sequence changes 2006-05-05 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2009-08-12 (Christophe Dunand)
Peroxidase information: BoPrx25_other
Name BoPrx25_other
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx25_other
start..stop		 S start..stop
BrPrx25-1Aa_other 377 5e-134 1..188 1..188
TsPrx25 359 4e-127 1..188 1..188
BstrPrx81 354 4e-125 1..188 1..188
BrPrx25-1Ab_other 353 8e-125 1..188 1..188
Literature and cross-references BoPrx25_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BZ048627.1 [5' end]
EST ref. GenBank:   AM057858.1 [5' end]
Protein sequence: BoPrx25_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   188 (164)
PWM (Da):   %s   19837.11 (17159.8)  
PI (pH):   %s   6.9 (6.91) Peptide Signal:   %s   cut: 25 range:25-188
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGVYFGNYCY VMIIVLVLGA EVRSQSLKNG YYSTSCPKAE SIVRSTVESH FDSDPTISPG LLRLHFHDCF VQGCDGSVLI KGKSAEQAAL ASTGLRGFEV IDDAKARLES VCPGVVSCAD 
ILALAARDAV DLSSGPSWTV PTGRKDGRIS LASKASNLPS PLDSVAVQRQ KFQAKGLDTH DLVTLLGA 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 2 GSS (BZ043309: short end of the exon 3, BZ048627). 3' end is missing. Variety="alboglabra".