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Entry information : BoPrx25_other
Entry ID 3005
Creation 2006-05-05 (Christophe Dunand)
Last sequence changes 2006-05-05 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2009-08-12 (Christophe Dunand)
Peroxidase information: BoPrx25_other
Name BoPrx25_other
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx25_other
start..stop		 S start..stop
BrPrx25-1Aa_other 377 4.62e-134 1..188 1..188
TsPrx25 359 4.46e-127 1..188 1..188
BstrPrx81 354 4.14e-125 1..188 1..188
BrPrx25-1Ab_other 353 8.52e-125 1..188 1..188
Literature and cross-references BoPrx25_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BZ048627.1 [5' end]
EST ref. GenBank:   AM057858.1 [5' end]
Protein sequence: BoPrx25_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   188 (164)
PWM (Da):   %s   19837.11 (17159.8)  
PI (pH):   %s   6.9 (6.91) Peptide Signal:   %s   cut: 25 range:25-188
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGVYFGNYCY VMIIVLVLGA EVRSQSLKNG YYSTSCPKAE SIVRSTVESH FDSDPTISPG LLRLHFHDCF VQGCDGSVLI KGKSAEQAAL ASTGLRGFEV IDDAKARLES VCPGVVSCAD 
ILALAARDAV DLSSGPSWTV PTGRKDGRIS LASKASNLPS PLDSVAVQRQ KFQAKGLDTH DLVTLLGA 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 2 GSS (BZ043309: short end of the exon 3, BZ048627). 3' end is missing. Variety="alboglabra".