Entry information : BoPrx22-1Ca_other
Entry ID 3010
Creation 2009-08-10 (Christophe Dunand)
Last sequence changes 2009-08-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx22-1Ca_other
Name BoPrx22-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx040]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx22-1Ca_other
start..stop
S start..stop
CagraPrx11 335 2.3e-116 1..261 1..312
BrPrx22-1Aa_other 296 1.31e-100 1..146 1..146
BrPrx22-1Aa_other 211 1.59e-67 160..261 249..350
AlyPrx22 271 7.26e-91 1..146 1..146
AlyPrx22 162 3.09e-48 160..261 249..349
TsPrx23 271 7.89e-91 1..146 1..146
TsPrx23 152 1.7e-44 160..261 249..350
Literature and cross-references BoPrx22-1Ca_other
DNA ref. GenBank:   BH973261.1 [5' end]
EST ref. GenBank:   AM061863.1 [5' end]  AM061235.1 [3' end]
Protein sequence: BoPrx22-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   261 (232)
PWM (Da):   %s   27269.49 (24259.1)  
PI (pH):   %s   6.11 (5.31) Peptide Signal:   %s   cut: 30 range:30-261
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRFSHSFSCS AMGALILGCL LLQASNSNAQ LRPDFYFRTC RQVFDIIGNV IVDELSSDPR IAASLLRLHF HDCFVNGCDA SILLDNSTSF RTEKDAAPNA NSARGFNVID RMKDEIELAC  PRTVSCADIL TIASxxSVLL SGGPWWxxxx xxxxxxxxxN FDPVTPDGFD QQYYTNLRQG KGLIQSDQEL FSTPRADTIP LVEQYSNNRF VFFQAFAEAM IRMGNLKPLT GTQGEIRQNC 
RVVNSRIRSV KNEDHGVVSS I 

Retrieve as FASTA  
Remarks Partial sequence from GSS and 3 ESTs (AM059373, AM061235). No overlap.