Entry information : BoPrx69-1Ca_other
Entry ID 3011
Creation 2009-08-10 (Christophe Dunand)
Last sequence changes 2009-08-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx69-1Ca_other
Name BoPrx69-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx69-1Ca_other
start..stop
S start..stop
BrPrx70-1Ab_other 384 1e-136 1..199 1..199
ThPrx69 358 3e-126 1..199 1..199
TsPrx69 358 3e-126 1..199 1..199
CagraPrx72 323 1e-112 1..199 1..199
Literature and cross-references BoPrx69-1Ca_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   CC946052.1 [5' end]   CC946058.1 [Fragment]
EST ref. GenBank:   AM057900.1 [5' end]
Protein sequence: BoPrx69-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   199 (176)
PWM (Da):   %s   21124.03 (18691.6) Transmb domain:   %s   i7-24o
PI (pH):   %s   9.46 (9.12) Peptide Signal:   %s   cut: 24 range:24-199
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGRGYNLLFI LVTFLVLVAA VAAQGNSGSN RGVGQRPRVG FYGNRCRNVE SIVTSVVRKH VQSNPANAPG ILRMHFHDCF VRGCDGSVLI AGNNTERTAG PNRSLRGFEA IEEAKTRLEA 
ECPGIVSCAD ILTLAARDAV VLTGGQGWRV PLGRLDGRIS QASDVILPGP FDAVDKQKRD FAAKTLNTID LVTLVGGHT 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 4 GSS (CC946052, BH949192, CC946058) , (no intron 1, intron 2 and 3 present). Small 3' end is missing. var. alboglabra