View Redoxidase 3017

Entry information : BoPrx07-2Ca_other

Entry ID	3017
Creation	2006-09-01 (Christophe Dunand)
Last sequence changes	2006-09-01 (Christophe Dunand)
Sequence status	partial
Reviewer	Filippo Passardi
Last annotation changes	2012-05-10 (Christophe Dunand)

Peroxidase information: BoPrx07-2Ca_other

Name

BoPrx07-2Ca_other

Class

Class III peroxidase [Orthogroup: Prx031]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica

Organism

Brassica oleracea (Cauliflower) [TaxId: 3712 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	BoPrx07-2Ca_other start..stop	S start..stop
BrPrx07-1Aa_other	607	0	7..307	51..351
BrPrx07-1Ab_other	557	0	9..307	49..347
BrPrx07-1Ac_other	555	0	9..307	44..342
NoffPrx07-1B	547	0	9..307	52..350

Literature and cross-references BoPrx07-2Ca_other

Literature	Ayele,M., Haas,B.J., Kumar,N., Wu,H., Xiao,Y., Van Aken,S., Utterback,T.R., Wortman,J.R., White,O.R. and Town,C.D. Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis, Genome Res. 15 (4), 487-495 (2005)
DNA ref.	GenBank: BZ461371

Protein sequence: BoPrx07-2Ca_other

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	306
PWM (Da):	33861.26
PI (pH):	7.98

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

VLVSFGHQLS LSYYDRICPD FEKIVATKVR EWTKKDSSLG PALLRLLFHD CGVTGCDASV LLDHEGSERR SPASKTLRGF ELIDDIKSEI EKACPGLVSC ADILTAASRD ATFQLGGPYW PNAYGRRDST DSYARDVEKV PSGRRDITGL LETFQSYGLN VLDLVVLSGA HTIGKAYCGT IQSRLYNFNA TYGTDPSIES KYADFLRRKC RVASETVYLD AETPVKFDNQ YYINLQKNMG
VLTTDQELVK DPRTAPLVKA FAEQPPHMFR *QFAVSMAKL VNVGVITGEE RVGVIRKVCS KSNSRPY

Retrieve as FASTA

Remarks

Partial sequence from 4 GSS (BZ461371, BH447521, BH946549, CC959878), no EST and only intron 1. Short PS is missing and early stop codon.