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Entry information : BnPrx52-1_other
Entry ID 3036
Creation 2007-01-01 (Christophe Dunand)
Last sequence changes 2007-01-01 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2009-08-14 (Christophe Dunand)
Peroxidase information: BnPrx52-1_other
Name BnPrx52-1_other
Class Class III peroxidase     [Orthogroup: Prx008]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx52-1_other
start..stop		 S start..stop
BrPrx52-1Aa_other 365 3.38e-129 1..204 1..204
BstrPrx47 363 1.4e-128 1..204 1..204
BoPrx52-1Cb_other 351 9.99e-124 1..204 1..205
BnPrx52-2_other 351 1.09e-123 1..204 1..205
Literature and cross-references BnPrx52-1_other
Literature Selvaraj,G., Kurylo,E., Hirji,R. and Datla,R. Transcriptome analysis of early seed development in canola, Unpublished (2004)
DNA ref. GenBank:   DU105414.1 [5' end]
EST ref. AphanoDB:   CN727046.1 [5' end]
Protein sequence: BnPrx52-1_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   204 (179)
PWM (Da):   %s   21211.72 (18458.2)  
PI (pH):   %s   8.78 (8.78) Peptide Signal:   %s   cut: 26 range:26-204
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASNQFVSIL VLVVTLLLQR DNNNAVKAQL TTNFYSTSCP NLLSTVKSGV KSAVSSQPRM GASILRLFFH DCFGNGCNGS ILLDDTSSFT GEQNAGPNRN SARGFTVIDT IKSAVEKACP 
GVVSCADILA IAARDSVVQP GGPNWNVKVG RRDAKTASQA AANSNIPAPS MSLSQLISSF SAVGLSTRDM VALSGAHTTE QSRC 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 1 GSS (exon 1 and 2), 3' end is missing.