1. Browse the Database
  2. View Redoxidase
Entry information : BrPrx71-1Aa_other (Bra024269)
Entry ID 3039
Creation 2006-05-12 (Christophe Dunand)
Last sequence changes 2006-05-12 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx71-1Aa_other (Bra024269)
Name (synonym) BrPrx71-1Aa_other (Bra024269)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Whole plant
Inducer Salt stress
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx71-1Aa_other
start..stop		 S start..stop
BnPrx71-1Ca_other 659 0 1..328 1..328
TsPrx71 607 0 1..328 1..327
CrubPrx67 600 0 1..328 1..328
CagraPrx67 600 0 1..328 1..328
Literature and cross-references BrPrx71-1Aa_other (Bra024269)
Literature Kang,J.S., Ryu,S.H., Yang,K.A. and Lim,C.O. Expressed Sequence Tags of NaCl treated Chinese cabbage seedlings, Unpublished (2004)
DNA ref. GenBank:   DX037740 [3' end]
EST ref. GenBank:   CV544618 [5' end]  EX096149.1 [3' end]
Cluster/Prediction ref. UniGene:   Bra.5612
Protein sequence: BrPrx71-1Aa_other (Bra024269)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (305)
PWM (Da):   %s   34559.43 (31993.1) Transmb domain:   %s   i7-26o
PI (pH):   %s   8.43 (8.41) Peptide Signal:   %s   cut: 24 range:24-328
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNFVRSLCVF ITFLSCLVIS VHGQAAARPG PGSGTRIGFY STTCPNAETI VRNAVTAGFS SNPRIAPGIL RMHFHDCFVQ GCDGSILITG TNTERTAVPN LNLRGFEVID NAKTQLEAAC  PGVVSCADIL ALAARDSVVL TRGTSWPVPT GRRDGRVSLA SNANNLPGPG DSVAVQQQKF SALGLSTREL VVLVGGHTIG TAGCATFRNR LFNSTTGPAD PTIDPTFLAQ LQTQCPQNGD 
ASVRVDLDTG SATTFDTSYF NNLSRGRGVL QSDQVLWTDP ATRPIVQQLM SPRSTFNGDF ARAMVRMSNI GVLTGASGEI RRVCSAVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 2 and 3), 10 ESTs and 1 GSS (DX037740). Cultivar="Jangwon" and "Chiifu".