Entry information : BrPrx17-1Aa_other (Bra038526)
Entry ID 3045
Creation 2009-08-05 (Christophe Dunand)
Last sequence changes 2012-07-24 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2014-04-10 (Christophe Dunand)
Peroxidase information: BrPrx17-1Aa_other (Bra038526)
Name (synonym) BrPrx17-1Aa_other (Bra038526)
Class Class III peroxidase    [Orthogroup: Prx020]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue types Etiolated seedlings
Flower buds
Flowers
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx17-1Aa_other
start..stop
S start..stop
CrubPrx17-1A 606 0 1..327 1..330
CagraPrx31 605 0 1..327 1..330
BrPrx17-1Ab_other 604 0 1..327 1..327
AlyPrx17 602 0 4..327 3..327
Literature and cross-references BrPrx17-1Aa_other (Bra038526)
Literature Bancroft,I., Huckle,E.J., Trick,M. and Beckett,P. BAC end sequence of Brassica rapa, Unpublished
DNA ref. GenBank:   AC232478.1 (40901..39737)
EST ref. GenBank:   EX086826.1 [5' end]
Protein sequence: BrPrx17-1Aa_other (Bra038526)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (310)
PWM (Da):   %s   36638.36 (34429.1)  
PI (pH):   %s   5.15 (4.93) Peptide Signal:   %s   cut: 21 range:21-330
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSLLLPHLII HLLLLTMVTG EILRPRFYSE TCPEAESIVR DEMKKAMIRE ARSVASVMRL QFHDCFVNGC DGSVLLDDTP NMLGEKLSLS NINSLRSFEV VDDIKEALEK ACPSTVSCAD  IVIMASRDAV ALTGGPDWEV KLGRKDSLTA SQKDSDDIMP SPRANATFLI DLFERFDLSV RDMVALSGSH SIGKGRCFSI MFRLYNQSGS GKPDPALEPV YRKKLNQLCP LGGDENVTGD 
LDATPRVFDN QYFKDLVSGR GFLNSDQTLY TSRETRGYVK RFSEDEGEFF RAFEEGMVKL GDLQSGRPGE VRLNCRVVNT RHNDVLLGDS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (intron 1 and 2) and 2 ESTs (BQ791070). Incorrect prediction from Phytozome: short PS is missing.
Promoter
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Send to cis Analysis