The peroxidases and oxidases database
Entry information : BrAPx01-1Aa_other (Bra031598)
Entry ID 3125
Creation 2006-05-23 (Christophe Dunand)
Last sequence changes 2012-07-20 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrAPx01-1Aa_other (Bra031598)
Name (synonym) BrAPx01-1Aa_other (Bra031598)
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrAPx01-1Aa_other
start..stop		 S start..stop
BjAPx02 511 0 1..250 1..250
BoAPx01_other 509 0 1..250 1..250
BnAPx02_other 509 0 1..250 1..250
TparAPx01 502 0 1..250 1..250
Literature and cross-references BrAPx01-1Aa_other (Bra031598)
Literature Ryu,S.H., Kang,J.S., Yang,K.A. and Lim,C.O. Expressed Sequence Tags of Chinese cabbage Roots, Unpublished (2004)
EST ref. GenBank:   EX117278.1
Protein sequence: BrAPx01-1Aa_other (Bra031598)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250 (297)
PWM (Da):   %s   27488.8 (31928.7)  
PI (pH):   %s   6.04 (6.74) Peptide Signal:   %s   cut: 26 range:26-322
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTKSYPTVSE DYQKAIEKCK RKLRGLIAEK NCAPIMVRLA WHSAGTFDCA SRTGGPFGTM RFDAEQGHGA NSGIHIALRL LEPIREQFST ISFADFHQLA GVVAVEVTGG PEIPFHPGRE  DKPQPPPEGR LPDATKGCDH LRQVFTKQMG LSDKDIVALS GAHTLGRCHK DRSGFEGAWT SNPLIFDNSY FKELLSGEKE GLLQLVSDKA LLDDPVFRPL VEKYAADEEA FFADYAEAHL 
KLSELGFADA * 

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns) and 5 ESTs (Brassica rapa subsp. pekinensis). Incorrect prediction from Phytozome: last short exon is missing.