Entry information : PtPrx56 (POPTR_0005s21740 / PT05G10420 / Potri.005G195600)
| Entry ID | 3146 |
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| Creation | 2010-01-18 (Christophe Dunand) |
| Last sequence changes | 2010-06-22 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Qiang Li |
| Last annotation changes | 2012-03-08 (Qiang Li) |
Peroxidase information: PtPrx56 (POPTR_0005s21740 / PT05G10420 / Potri.005G195600)
| Name (synonym) | PtPrx56 (POPTR_0005s21740 / PT05G10420 / Potri.005G195600) | ||||||||||||||||||||||||||||||||||||
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| Class | Class III peroxidase [Orthogroup: Prx005] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Salicaceae Populus | ||||||||||||||||||||||||||||||||||||
| Organism | Populus trichocarpa (Western balsam poplar) [TaxId: 3694 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
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| Tissue types | Buds Leaves Stems |
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| Inducers | Insect damage (Spodoptera exigua, Meloidogyne, Aphib) Pathogen interaction |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '3146' 'join(20845212..20845460,20845573..20845767,20847168..20847788)' |
Exons►
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Literature and cross-references PtPrx56 (POPTR_0005s21740 / PT05G10420 / Potri.005G195600)
| Literature | Ralph,S., Oddy,C., Cooper,D., Yueh,H., Jancsik,S., Kolosova,N., Philippe,R.N., Aeschliman,D., White,R., Huber,D., Ritland,C.E., Benoit,F., Rigby,T., Nantel,A., Butterfield,Y.S.N., Kirkpatrick,R., Chun,E., Liu,J., Palmquist,D., Wynhoven,B., Stott,J., Yang,G.,Barber,S., Holt,R., Siddiqui,A., Jones,S., Marra,M., Ellis,B.E., Douglas,C.J., Ritland,K. and Bohlmann,J. Genomics of hybrid poplar (Populus trichocarpax deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences Mol. Ecol. 15 (5), 1275-1297 (2006). |
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| DNA ref. | Phytozome 12: scaffold_5 (20845212..20847788) |
| Cluster/Prediction ref. | UniGene: Pth.10738 |
| Omic ref. | ePlant: Potri.005G195600 |
Protein sequence: PtPrx56 (POPTR_0005s21740 / PT05G10420 / Potri.005G195600)
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Complete sequence from genomic (chromo 5, introns 1 and 2) and 22 ESTs. | ||||||||||||
| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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