Entry information : PtPrx59 (POPTR_0005s07390 / Potri.005G072800)
Entry ID 3149
Creation 2006-06-22 (Claudia Cosio)
Last sequence changes 2006-06-22 (Claudia Cosio)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2014-04-10 (Christophe Dunand)
Peroxidase information: PtPrx59 (POPTR_0005s07390 / Potri.005G072800)
Name (synonym) PtPrx59 (POPTR_0005s07390 / Potri.005G072800)
Class Class III peroxidase    [Orthogroup: Prx020]
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation N/D
Tissue type Flowers
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtPrx59
start..stop
S start..stop
PtPrx35 610 0 1..330 1..330
RcPrx30 571 0 1..330 1..329
MePrx63 554 0 1..330 1..327
MePrx22 551 0 1..330 1..328
Gene structure Fichier Exons


exon

Literature and cross-references PtPrx59 (POPTR_0005s07390 / Potri.005G072800)
Literature DOE joint genome institute.
DNA ref. Phytozome 12:   Chr05 (5310069..5308172)
EST ref. GenBank:   BU870303.1  BU871653.1
Omic ref. ePlant:   Potri.005G072800
Protein sequence: PtPrx59 (POPTR_0005s07390 / Potri.005G072800)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (311)
PWM (Da):   %s   36471 (34500.9)  
PI (pH):   %s   4.71 (4.71) Peptide Signal:   %s   cut: 20 range:20-330
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSPPLPAFLLLISIAFTSASVVPLQPGFYAETCPEAEFIVKDVMR
RNMIREPRSAASVMRFQFHDCFVN
GCDASMLLDDTPNMLGEKLSLSNIDSLRSYEVVDEIKEELERVCPGTVSCADIIIMASRDAVVLSGGPDWEVKLGREDSLTASQEDANNIMPSPRANASLLMDLFEGYNLSVKDMVALSG
SHSIGQARCFSIVFRLYNQSGSGKPDPTIEPRYKEKLNRLCPLGGDENVTGDLDATPTMFDNRYFKDLAAGRGFLNSDQTLYTFPETRKYVALFSKDQRTFFNAFVEGMIKMGDLQSGRP
GEIRSNCRMVNSRPVNALLES*

Retrieve as FASTA  
Remarks Complete sequence from genomic DNA (introns 1 and 2) and 2 ESTs (BU870303, BU871653).
Promoter
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Send to cis Analysis
DNA
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CDS
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