Entry information : PbPrx72
Entry ID 3159
Creation 2008-08-26 (Christophe Dunand)
Last sequence changes 2008-08-26 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-02-01 (Qiang Li)
Peroxidase information: PbPrx72
Name PbPrx72
Class Class III peroxidase    [Orthogroup: Prx005]
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus balsamifera (trichocarpa x deltoides)    [TaxId: 3695 ]
Cellular localisation N/D
Tissue types Leaves
Stems
Inducers Insect damage (Spodoptera exigua, Meloidogyne, Aphib)
Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value PbPrx72
start..stop
S start..stop
PtPrx72 667 0 1..331 1..331
PalPrx05 604 0 3..331 1..329
MePrx53 558 0 2..331 4..334
RcPrx16 558 0 12..331 16..335
Literature and cross-references PbPrx72
Literature Ralph,S., Oddy,C., Cooper,D., Yueh,H., Jancsik,S., Kolosova,N., Philippe,R.N., Aeschliman,D., White,R., Huber,D., Ritland,C.E., Benoit,F., Rigby,T., Nantel,A., Butterfield,Y.S.N., Kirkpatrick,R., Chun,E., Liu,J., Palmquist,D., Wynhoven,B., Stott,J., Yang,G.,Barber,S., Holt,R., Siddiqui,A., Jones,S., Marra,M., Ellis,B.E., Douglas,C.J., Ritland,K. and Bohlmann,J. Genomics of hybrid poplar (Populus trichocarpa x deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences Mol. Ecol. 15 (5), 1275-1297 (2006).
EST ref. GenBank:   DT506706.1 [5' end]   DT511376.1 [3' end]
Protein sequence: PbPrx72
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (305)
PWM (Da):   %s   34848 (32121.6)  
PI (pH):   %s   5.18 (4.72) Peptide Signal:   %s   cut: 27 range:27-331
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSPPPSTSFF SVAIVLLGMM LPHSKAQLNA TFYANTCPNV SSIVSNVVQQ AFQSDSRIGA SLIRLHFHDC FVNGCDASIL LDNSSSILSE KFAAPNVNSI RGFGVVDNIK TAVENSCPGV  VSCADILALA AESSVSQSGG PSWSVLLGRR DSLTANQAGA NTAIPSPFEG LNNITAKFSA VGLNTNDLVA LSGAHTFGRA QCRTFSNRLY NFSNTGNPDP TLNTTYLTTL QQICPQNGSG 
TALANLDPTT SDAFDNNYFT NLQNNQGLLQ SDQELFSTPG AATITFVNNF SSNQTAFFQS FVQSMINMGN ISPLTGSSGE IRSDCKKVNG S 

Retrieve as FASTA  
Remarks Complete sequence from 4 ESTs. Cultivar="H11-11".