View Redoxidase 3159

Entry information : PbPrx72

Entry ID	3159
Creation	2008-08-26 (Christophe Dunand)
Last sequence changes	2008-08-26 (Christophe Dunand)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2011-02-01 (Qiang Li)

Peroxidase information: PbPrx72

Name

PbPrx72

Class

Class III peroxidase [Orthogroup: Prx004]

Taxonomy

Eukaryota Viridiplantae Streptophyta Salicaceae Populus

Organism

Populus balsamifera (trichocarpa x deltoides) [TaxId: 3695 ]

Cellular localisation

N/D

Tissue types

Leaves
Stems

Inducers

Insect damage (Spodoptera exigua, Meloidogyne, Aphib)
Pathogen interaction

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PbPrx72 start..stop	S start..stop
PtPrx72	667	0	1..331	1..331
PalPrx05	604	0	3..331	1..329
RcPrx16	558	0	12..331	16..335
MePrx53	558	0	2..331	4..334

Literature and cross-references PbPrx72

Literature	Ralph,S., Oddy,C., Cooper,D., Yueh,H., Jancsik,S., Kolosova,N., Philippe,R.N., Aeschliman,D., White,R., Huber,D., Ritland,C.E., Benoit,F., Rigby,T., Nantel,A., Butterfield,Y.S.N., Kirkpatrick,R., Chun,E., Liu,J., Palmquist,D., Wynhoven,B., Stott,J., Yang,G.,Barber,S., Holt,R., Siddiqui,A., Jones,S., Marra,M., Ellis,B.E., Douglas,C.J., Ritland,K. and Bohlmann,J. Genomics of hybrid poplar (Populus trichocarpa x deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences Mol. Ecol. 15 (5), 1275-1297 (2006).
EST ref.	GenBank: DT506706.1 [5' end] DT511376.1 [3' end]

Literature

Ralph,S., Oddy,C., Cooper,D., Yueh,H., Jancsik,S., Kolosova,N., Philippe,R.N., Aeschliman,D., White,R., Huber,D., Ritland,C.E., Benoit,F., Rigby,T., Nantel,A., Butterfield,Y.S.N., Kirkpatrick,R., Chun,E., Liu,J., Palmquist,D., Wynhoven,B., Stott,J., Yang,G.,Barber,S., Holt,R., Siddiqui,A., Jones,S., Marra,M., Ellis,B.E., Douglas,C.J., Ritland,K. and Bohlmann,J. Genomics of hybrid poplar (Populus trichocarpa x deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences Mol. Ecol. 15 (5), 1275-1297 (2006).

EST ref.

GenBank: DT506706.1 [5' end] DT511376.1 [3' end]

Protein sequence: PbPrx72

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	331 (305)
PWM (Da):	34848 (32121.6)
PI (pH):	5.18 (4.72)	Peptide Signal:	cut: 27 range:27-331

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MSPPPSTSFF SVAIVLLGMM LPHSKAQLNA TFYANTCPNV SSIVSNVVQQ AFQSDSRIGA SLIRLHFHDC FVNGCDASIL LDNSSSILSE KFAAPNVNSI RGFGVVDNIK TAVENSCPGV VSCADILALA AESSVSQSGG PSWSVLLGRR DSLTANQAGA NTAIPSPFEG LNNITAKFSA VGLNTNDLVA LSGAHTFGRA QCRTFSNRLY NFSNTGNPDP TLNTTYLTTL QQICPQNGSG
TALANLDPTT SDAFDNNYFT NLQNNQGLLQ SDQELFSTPG AATITFVNNF SSNQTAFFQS FVQSMINMGN ISPLTGSSGE IRSDCKKVNG S

Retrieve as FASTA

Remarks

Complete sequence from 4 ESTs. Cultivar="H11-11".