Entry information : BnPrx41-2_other
Entry ID 3161
Creation 2006-05-24 (Christophe Dunand)
Last sequence changes 2006-05-24 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2009-08-17 (Christophe Dunand)
Peroxidase information: BnPrx41-2_other
Name BnPrx41-2_other
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx41-2_other
start..stop
S start..stop
BrPrx41-1Ab_other 433 8.51e-156 1..211 1..211
BnPrx41-4_other 424 2.44e-153 1..211 1..211
BoPrx41-1Cb_other 424 2.89e-152 1..211 1..211
AlyPrx41 376 2.41e-133 4..211 2..209
Literature and cross-references BnPrx41-2_other
Literature REFERENCE 1 Town,C.D., Shetty,J., Scott,R., Koo,H., Trick,M. and Bancroft,I. BAC end sequence of Brassica napus, Unpublished (2005)
REFERENCE 2 Malik,M.R., Wang,F., Dirpaul,J.M., Zhou,N., Polowick,P.L., Ferrie, A.M. and Krochko,J.E. Transcript profiling and identification of molecular markers for early microspore embryogenesis in Brassica napus. Plant Physiol 144 (1), 134-154 (2007)
DNA ref. GenBank:   DU105156 [5' end]
EST ref. GenBank:   GR437033.1 [5' end]
Cluster/Prediction ref. UniGene:   Bna.16095 [5' end]
Protein sequence: BnPrx41-2_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   211 (189)
PWM (Da):   %s   23036.72 (20485.3) Transmb domain:   %s   i5-27o
PI (pH):   %s   6.86 (6.86) Peptide Signal:   %s   cut: 23 range:23-211
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLTSWFLNVF FLVLAFVPLI LSAPATSLTK DYYQKTCPDF SKIVRETVTP KQAQQPTTAA GTLRVFFHDC FLEGCDASVL VATNSFNKAE RDDELNESLP GDAFDIVTRI KTALELSCPG 
VVSCADILAQ STRDLITIVG GPFYEVKLGR KDGFESKAHK VHGNIPIANH TVHDMMSIFK KNGFSLKEMV ALSGGHTVGF AHCIEFSSRL F 

Retrieve as FASTA  
Remarks Partial sequence from 1 GSS (without intron) and 4 ESTs. 3' end is missing. Cultivar="Tapidor".