View Redoxidase 3172

Entry information : PtPrx77(POPTR_0007s02560 / Potri.007G122300)

Entry ID	3172
Creation	2006-07-21 (Claudia Cosio)
Last sequence changes	2010-06-29 (Catherine )
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2020-04-22 (Catherine )

Peroxidase information: PtPrx77(POPTR_0007s02560 / Potri.007G122300)

Name

PtPrx77(POPTR_0007s02560 / Potri.007G122300)

Class

Class III peroxidase [Orthogroup: Prx027]

Taxonomy

Eukaryota Viridiplantae Streptophyta Salicaceae Populus

Organism

Populus trichocarpa (Western balsam poplar) [TaxId: 3694 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PtPrx77 start..stop	S start..stop
PtPrx28	661	0	1..327	1..327
PtPrx29	637	0	1..327	1..327
RcPrx10	531	0	1..327	1..327
MePrx106	521	0	1..327	1..328

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '3172' 'complement(join(14055572..14055978,14056055..14056220,14056301..14056489,14056620..14056841))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	14056620..14056841	220	N° 2	14056301..14056489	187	N° 3	14056055..14056220	164	N° 4	14055572..14055978	405
complement(join(14055572..14055978,14056055..14056220,14056301..14056489,1405662 0..14056841))

Literature and cross-references PtPrx77(POPTR_0007s02560 / Potri.007G122300)

DNA ref.	Phytozome 12: Chr7 (14056841..14055572)
Omic ref.	ePlant: Potri.007G122300

Protein sequence: PtPrx77(POPTR_0007s02560 / Potri.007G122300)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	327 (301)
PWM (Da):	35379.17 (32595.6)	Transmb domain:	i7-29o
PI (pH):	8.38 (8.20)	Peptide Signal:	cut: 27 range:27-327

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAVQKLFPVLFLQLALAFLLAGLTNAGGLQLGFYQGACPDAELIV
HQTLYRYISRDPTLAAPLLRMHFHDCFIRGCEGSVLLSSTKNNQAEKDAIPNKTLRGFNVIDAVKSALEKKCPGVVSCADILALVARDAVLMIGGPRWDVPTGRRDGRVSIANEALFNLPSPFANITVLKQQFAATGLSVKDLAVLSGG
HTIGIGHCTIISNRLYNFTGKGDTDPSLDPRYAAQLKNKCKPGNSNTVVEMDPGSFKSFDEDYYNIVAKRRGLFRSDAALLDDAETRGYVKFQSMTQGSTFAQDFAESMVKMGYIGVLTG
EQGEIRKHCAVVN

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 7, 3 introns). 1 EST from P.trichocarpa x deltoides. Also found in scaffold_1693 (1716..3021, POPTR_1693s00200).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTGTTCAAAAGCTTTTCCCAGTCCTCTTTCTTCAACTAGCCCTTGCTTTTTTGCTTGCAGGCCTCACTAATGCAGGGGGTTTGCAACTCGGGTTCTACCAGGGAGCATGTCCTGAT
GCAGAGCTTATAGTCCATCAAACTCTTTACCGTTACATTTCTAGGGACCCAACCCTTGCTGCTCCTTTGCTGAGAATGCATTTCCATGATTGTTTCATCAGGGTAAGCCCTTAAGCTACA
CTACTGTGCAATTTACAATGTTACCTTGCCACAAAAGCACTTGGAAATCAAGCGTTTTCATCTTGTTTAGGAAACCACACAATTTCATATCCTAACAAGTTATTCTTTCCAGGGGGATGT
GAGGGTTCTGTGCTCCTAAGTTCTACAAAGAATAATCAAGCTGAGAAAGACGCCATCCCAAATAAAACCTTAAGAGGGTTCAATGTCATTGATGCTGTAAAATCAGCACTAGAAAAGAAG
TGTCCTGGTGTGGTTTCCTGTGCCGATATCTTGGCCTTGGTTGCTCGTGACGCGGTTCTAATGGTATCAAATTTACCAACACAATTTATCACCACTGATTAACTGGATCATTATGCCGAT
GCTTAACCAGTTTTTCCATTCAGATATTGGCGGACCACGTTGGGATGTTCCCACAGGACGCAGAGACGGAAGGGTGTCGATTGCCAACGAGGCTTTATTCAATTTACCATCTCCTTTTGC
CAACATAACTGTCCTGAAACAACAATTTGCTGCAACGGGTTTAAGTGTAAAGGACCTTGCAGTTTTATCAGGTAGTTTTCGTAACAAAAAAAGCTATCTATTAAGCAAAATATCAGCGTA
TTTACTTGGAATATGTTTTGGTGACAGGAGAGGACACACCATAGGAATTGGACACTGTACCATAATCTCGAACAGGTTGTACAATTTCACAGGCAAGGGAGATACTGACCCTTCATTGGA
CCCAAGATACGCTGCTCAACTGAAGAATAAATGTAAGCCTGGAAACTCCAACACAGTCGTTGAGATGGACCCTGGTAGCTTCAAGTCTTTCGACGAAGATTACTACAACATTGTAGCTAA
AAGAAGAGGGCTATTCCGATCTGATGCAGCTCTTCTTGACGATGCTGAAACAAGAGGCTATGTCAAATTTCAGTCAATGACACAGGGATCCACTTTTGCACAAGATTTTGCTGAATCCAT
GGTGAAAATGGGTTACATTGGAGTCCTGACCGGCGAACAAGGCGAAATCAGGAAACATTGTGCTGTTGTGAATTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTGTTCAAAAGCTTTTCCCAGTCCTCTTTCTTCAACTAGCCCTTGCTTTTTTGCTTGCAGGCCTCACTAATGCAGGGGGTTTGCAACTCGGGTTCTACCAGGGAGCATGTCCTGAT
GCAGAGCTTATAGTCCATCAAACTCTTTACCGTTACATTTCTAGGGACCCAACCCTTGCTGCTCCTTTGCTGAGAATGCATTTCCATGATTGTTTCATCAGGGGATGTGAGGGTTCTGTG
CTCCTAAGTTCTACAAAGAATAATCAAGCTGAGAAAGACGCCATCCCAAATAAAACCTTAAGAGGGTTCAATGTCATTGATGCTGTAAAATCAGCACTAGAAAAGAAGTGTCCTGGTGTG
GTTTCCTGTGCCGATATCTTGGCCTTGGTTGCTCGTGACGCGGTTCTAATGATTGGCGGACCACGTTGGGATGTTCCCACAGGACGCAGAGACGGAAGGGTGTCGATTGCCAACGAGGCT
TTATTCAATTTACCATCTCCTTTTGCCAACATAACTGTCCTGAAACAACAATTTGCTGCAACGGGTTTAAGTGTAAAGGACCTTGCAGTTTTATCAGGAGGACACACCATAGGAATTGGA
CACTGTACCATAATCTCGAACAGGTTGTACAATTTCACAGGCAAGGGAGATACTGACCCTTCATTGGACCCAAGATACGCTGCTCAACTGAAGAATAAATGTAAGCCTGGAAACTCCAAC
ACAGTCGTTGAGATGGACCCTGGTAGCTTCAAGTCTTTCGACGAAGATTACTACAACATTGTAGCTAAAAGAAGAGGGCTATTCCGATCTGATGCAGCTCTTCTTGACGATGCTGAAACA
AGAGGCTATGTCAAATTTCAGTCAATGACACAGGGATCCACTTTTGCACAAGATTTTGCTGAATCCATGGTGAAAATGGGTTACATTGGAGTCCTGACCGGCGAACAAGGCGAAATCAGG
AAACATTGTGCTGTTGTGAATTAA

Retrieve as FASTA