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Entry information : PtPrx[P]81 (POPTR_0004s00780 / PT00G28605 / Potri.004G006400)
Entry ID 3176
Creation 2006-07-21 (Claudia Cosio)
Last sequence changes 2012-03-08 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-03-08 (Qiang Li)
Peroxidase information: PtPrx[P]81 (POPTR_0004s00780 / PT00G28605 / Potri.004G006400)
Name (synonym) PtPrx[P]81 (POPTR_0004s00780 / PT00G28605 / Potri.004G006400)
Class Class III peroxidase     [Orthogroup: Prx006]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtPrx[P]81
start..stop		 S start..stop
GmPrx324 249 2.62e-83 4..191 3..200
EglPrx85 249 3.07e-83 1..191 1..192
EgrPrx85 249 4.69e-83 1..191 1..192
EcamPrx85 247 1.81e-82 1..191 1..192
Literature and cross-references PtPrx[P]81 (POPTR_0004s00780 / PT00G28605 / Potri.004G006400)
Literature DOE joint genome institute
DNA ref. Phytozome 12:   scaffold_4 (358450..357191)
Omic ref. ePlant:   Potri.004G006400
Protein sequence: PtPrx[P]81 (POPTR_0004s00780 / PT00G28605 / Potri.004G006400)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   221 (197)
PWM (Da):   %s   23834.21 (21351.8) Transmb domain:   %s   o4-22i
PI (pH):   %s   5.02 (4.83) Peptide Signal:   %s   cut: 25 range:25-221
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGNVSLIFML VVVVLAIRVG VGQSQLTYDY YRSSCLNVET IVRQEMLGIF LVDVTAPAAF LRLMFHDCQV QICDASILLD SGNSELFSSK NLGIRKQEAI GYIKSVLEAE CPGQVSCADI 
IVLAAKESVD FSGGPRIQIP LGRKDSTTSN NKQSDDLLPS PAVTVDELLH IFMSKGMDLE VSVAIMGxNE LLTQSSTAKY FATNVLTEGK GQARRYCNKV N 

Retrieve as FASTA  
Remarks Partial sequence from genomic (chromo 4). exon 3 is missing (=> no htig). complement(join(357191..357263,357531..357877,357917..357947,358238..358450))
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