Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
221 (197) |
PWM (Da): |
23834.21 (21351.8) |
Transmb domain: |
o4-22i |
PI (pH):
| 5.02 (4.83) |
Peptide Signal:
| cut: 25 range:25-221 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGNVSLIFML VVVVLAIRVG VGQSQLTYDY YRSSCLNVET IVRQEMLGIF LVDVTAPAAF LRLMFHDCQV QICDASILLD SGNSELFSSK NLGIRKQEAI GYIKSVLEAE CPGQVSCADI
IVLAAKESVD FSGGPRIQIP LGRKDSTTSN NKQSDDLLPS PAVTVDELLH IFMSKGMDLE VSVAIMGxNE LLTQSSTAKY FATNVLTEGK GQARRYCNKV N
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic (chromo 4). exon 3 is missing (=> no htig). complement(join(357191..357263,357531..357877,357917..357947,358238..358450))
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGAAATG TTTCTCTGAT TTTTATGTTA GTGGTGGTAG TGTTAGCGAT CAGAGTTGGT GTTGGCCAAT CCCAGCTTAC ATATGATTAC TACAGATCTT CGTGTCTAAA TGTGGAAACT
ATAGTTAGGC AAGAAATGCT AGGCATTTTC TTGGTGGATG TTACAGCACC AGCTGCTTTT CTTAGGCTCA TGTTCCATGA CTGCCAAGTT CAGGTTAAAA AAAATTATAT TTCCTTGTTT
GTTCTCTGCT TAGAAAAAAT ATGGTAATGT CATTGTAACA TATGGTTTCT TTCTATGGTG TCCTGCATTT TGAACTCAAG TCATGGCTCG TATAATCCTT GCTACTGTAT CTTCTTTCTT
CTTCTGAACC TATGTATTAT ATGGATTCGC TTATAAGCTG AAAATGATTG GTTGATATTG CTTGTACAAG GCACCAGTAG ACAGTAGTGT TATTAAGTTA GGTTTATTGT TCTTGCATGA
GAATCCTCTC ACTTTCTGTA TGCATATGTG ACGCGTCGAT CTTGCTGGAT TCAGGCAATT CTGAATTGTT TTCTTCAAAA ATGCTGGATT CAGGCAATTC TGAATTGTTT TCTTCAAAAA
ACTTAGGTAT CAGAAAGCAA GAAGCAATAG GGTATATAAA ATCTGTACTG GAAGCTGAGT GTCCAGGACA GGTATCTTGT GCAGATATTA TCGTATTAGC AGCTAAGGAA TCAGTAGACT
TCTCCGGAGG ACCCCGAATT CAGATCCCTT TAGGAAGGAA AGACTCTACC ACTAGTAACA ACAAACAGTC TGATGATCTT CTTCCTTCAC CAGCAGTAAC AGTTGATGAA TTGCTTCATA
TTTTCATGTC TAAAGGGATG GATTTGGAGG TATCAGTGGC CATCATGGGT TnnAATGAGT TATTAACACA ATCCAGTACT GCTGTTTATA TTGAGAAACA ACTTCAGACC TTTATGACAT
TAAAGATTAT CAATGCCAGT TCATAATTAA TGCATCTTGC ATTTCTGAGA TTAAAAATCA CTTAACCCTT AATTAAGCAT GCCAGTACAA GGAACTTATT GCAACCTTAA GGTTGCTACT
GTCATTAATG CAGCTACAGA TAGCATGGAA GTAACTACCA AAAACAGCAG AACACCATAA AAAATAGACG ACAAGAAATA CTGGCCATTT AGGGCATGGT GGCATGAAGA AAGTACTTTG
CAACTAATGT TCTTACAGAA GGGAAAGGAC AGGCCAGGAG ATACTGCAAC AAAGTGAACT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGAAATG TTTCTCTGAT TTTTATGTTA GTGGTGGTAG TGTTAGCGAT CAGAGTTGGT GTTGGCCAAT CCCAGCTTAC ATATGATTAC TACAGATCTT CGTGTCTAAA TGTGGAAACT
ATAGTTAGGC AAGAAATGCT AGGCATTTTC TTGGTGGATG TTACAGCACC AGCTGCTTTT CTTAGGCTCA TGTTCCATGA CTGCCAAGTT CAGATATGTG ACGCGTCGAT CTTGCTGGAT
TCAGGCAATT CTGAATTGTT TTCTTCAAAA AACTTAGGTA TCAGAAAGCA AGAAGCAATA GGGTATATAA AATCTGTACT GGAAGCTGAG TGTCCAGGAC AGGTATCTTG TGCAGATATT
ATCGTATTAG CAGCTAAGGA ATCAGTAGAC TTCTCCGGAG GACCCCGAAT TCAGATCCCT TTAGGAAGGA AAGACTCTAC CACTAGTAAC AACAAACAGT CTGATGATCT TCTTCCTTCA
CCAGCAGTAA CAGTTGATGA ATTGCTTCAT ATTTTCATGT CTAAAGGGAT GGATTTGGAG GTATCAGTGG CCATCATGGG TTnnAATGAG TTATTAACAC AATCCAGTAC TGCAAAGTAC
TTTGCAACTA ATGTTCTTAC AGAAGGGAAA GGACAGGCCA GGAGATACTG CAACAAAGTG AACTGA
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Retrieve as FASTA
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