Entry information : BoPrx71-1Ca_other
Entry ID 3194
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx71-1Ca_other
Name BoPrx71-1Ca_other
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx71-1Ca_other
start..stop
S start..stop
BnPrx71-1Ca_other 393 3e-140 1..195 1..195
BrPrx71-1Aa_other 391 1e-139 1..195 1..195
AhalPrx30 352 6e-124 1..195 1..195
TsPrx71 351 7e-124 1..195 1..194
Literature and cross-references BoPrx71-1Ca_other
Literature Ayele,M., Haas,B.J., Kumar,N., Wu,H., Xiao,Y., Van Aken,S., Utterback,T.R., Wortman,J.R., White,O.R. and Town,C.D. Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis. Genome Res. 15 (4), 487-495 (2005)
DNA ref. GenBank:   26718835   26718835
Protein sequence: BoPrx71-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   195 (172)
PWM (Da):   %s   20376.44 (17810.1) Transmb domain:   %s   i7-26o
PI (pH):   %s   8.51 (8.51) Peptide Signal:   %s   cut: 24 range:24-195
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNFVRSLCVF ITFLSCIVIS VHGQAAARPG PGSGTRIGFY STTCPNAETI VRNAVTAGFS SNSRIAPGIL RMHFHDCFVQ GCDGSILITG TNTERTAVPN LNLRGFEVID NAKTQLEAAC 
PGVVSCADIL ALAARDSVVL TRGTSWPVPT GRRDGRVSLA SNANNLPGPG DSVAVQQQKF SALGLSTREL VVLVG 

Retrieve as FASTA  
Remarks Partial sequence from 2 GSS (BZ449759, BH595088). No intron 1, intron 2. Last exon is missing.