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Entry information : BoPrx72-1Cb_other
Entry ID 3197
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx72-1Cb_other
Name BoPrx72-1Cb_other
Class Class III peroxidase     [Orthogroup: Prx004]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx72-1Cb_other
start..stop		 S start..stop
BrPrx72-1Ab_other 628 0 1..322 15..335
RsPrx72-1A 618 0 1..322 15..335
BrPrx72-1Aa_other 616 0 1..322 16..336
TsPrx72 608 0 1..322 15..335
Literature and cross-references BoPrx72-1Cb_other
Literature Ayele,M., Haas,B.J., Kumar,N., Wu,H., Xiao,Y., Van Aken,S., Utterback,T.R., Wortman,J.R., White,O.R. and Town,C.D. Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis. Genome Res. 15 (4), 487-495 (2005)
DNA ref. GenBank:   BZ449902 [5' end]  BZ449895 [3' end]
Protein sequence: BoPrx72-1Cb_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322
PWM (Da):   %s   35895.19 Transmb domain:   %s   i12-34o
PI (pH):   %s   8.62
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
VAFSPLCLIS KAYESGSYLF PQYYDHSCPK AQEIVQSIVA KAFAQDPRMP ASLLRLHFHD CFVKGCDASI LLDNSGTIIS EKRSNPNRNS ARGFEVIEEI KHALEQECPE TVSCADILAL  AARDSTVITG GPSWEVPLGR RDARGASLSG STMTFLLPTH HTFQTILTKF KRQGLNLVDL VSLxGSHTIG NSRCTSFRQR LYNQSGNGKP DLTLNQYYGS VLRKQCPRSG GDQNLFFLDL 
VTPFKFDNHY FKNLIMYKGL LSSDEVLFTK NRESKELVEL YAENQEAFFE QFAKSMVKMG NISPLTGARG EIRRICRRVN HA 

Retrieve as FASTA  
Remarks Partial sequence from 2 GSS. BZ449902: Intron 1 (42 nt), 2 and 3, BZ449895: Intron 3 (213nt) and exon 4. No overlap between the two sequences.