Entry information : PtPrx[P]66 (POPTR_0005s25330)
Entry ID 3201
Creation 2006-06-14 (Claudia Cosio)
Last sequence changes 2012-03-08 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-03-08 (Qiang Li)
Peroxidase information: PtPrx[P]66 (POPTR_0005s25330)
Name (synonym) PtPrx[P]66 (POPTR_0005s25330)
Class Class III peroxidase     [Orthogroup: Prx035]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtPrx[P]66
start..stop
S start..stop
PtPrx66 423 4e-150 13..290 44..345
AfpPrx12 409 6e-143 12..290 151..453
AcoPrx01 409 6e-143 12..290 160..462
VvPrx89 404 1e-142 1..290 31..352
Literature and cross-references PtPrx[P]66 (POPTR_0005s25330)
DNA ref. Phytozome 12:   scaffold_5 (23625972..23624302)
Protein sequence: PtPrx[P]66 (POPTR_0005s25330)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   226
PWM (Da):   %s   25139.41  
PI (pH):   %s   6.17
Sequence 0
Send to BLAST
Send to Peroxiscan
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GWGGPFGGGS FGLFTEFYQF SCPQANDTVM SVLRKAIAKD PRMAASLLRL HQGCDASLLL DDSSKIVSEK NSAPNKNSLR GFEVVDEIKA NLEEVQSSGP NWELPLGRKD xKTANLSGSN  NNIPTLNSTI QNLITFFKRQ GLNEVDLAAL GGHTIGVARC VTFKQRLxNQ NGNNQPDQTL KKNYFLDLKS VCPRSGRDDN LSPLDLASSA KLDNSxHFKL LLWGKGLLTS NEVLYTGKxD 
GKTIQLVKRN AEDEGLFYEH FxAKSMVKMG NISPLTGFNG EVRRNCRLVN 

Retrieve as FASTA  
Remarks Partial sequence from genomic (chromo 5, ). Short PS, FHDC and SCADIL are missing. complement(join(23624302..23624712,23624836..23625001,23625536..23625664,23625820..23625972))
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGCTGGGGTG GTCCTTTTGG CGGTGGCTCG TTTGGTCTTT TCACTGAGTT TTATCAGTTT TCATGCCCCC AAGCAAATGA CACTGTTATG TCAGTGTTAA GAAAAGCTAT TGCAAAGGAC  CCCCGGATGG CTGCCTCTTT GCTAAGGCTG CATTCATTCA TTCTTCTTCT TCTTCTTCTC CTTCTGCTCC TCCTCCTCCT CGTTTTACAC AATCTGTTAC CTTTTCTTTG AAATTTTCGT  ATCATATGGC CTTGAACAAA TTTATAAGCA CTGTGTTACT TTATTAAATT GTCATGCTAT TGATCTGGCA GGGCTGTGAT GCATCATTAT TGTTAGACGA TAGTTCAAAG ATCGTGAGTG  AGAAGAATTC AGCACCAAAC AAGAATTCCC TTAGAGGATT TGAAGTGGTT GATGAAATCA AGGCTAATTT GGAAGAAGTT GTTAGTATAA TGGAGACAAA CAATGCCCCA ACTCCACTAT  ATACTAGTGG GAACAACTCA TCTCCCACTT AGCACAAAGT GGAAGCACAT GGTGGGAACA ACTTATCCCA CTTAGCATAA AGTGGAAGTT TATGGTGGCC ATGATCTCTT GCTCCCAGCT  TAGTCTATAA TTAGACACAT TGAAGAGCTG AGGCTTATGT GCTAGAAGAG AAAGTAGAGA ACAGAGAAAT AGAGAGAGCT AGAGTTAGTA GAGTTGAGTT GAGAAGAGTT TTCTGCTCCT  CCTTATTTGT ATTGTTTCTT TGATTGATTA ATACAAACCA GTAGCTCCGT GGAGTAGGCA AGTTGTCGAA CCACATAAAT GTGTGTGTGT TTGATTTCTA AAATTTCCCA ACAACTGGTA  TCAGAACTTG TTCTTGAAAA AAAGGGTGTT TGATCCAAAC CCAGAAATAA AGGTTCTCAA AACGTGTTTT TATACATACC ATCATGTAGG TGAAGAAGAT ATACATTTTT CTGCTAACAA  ACACTGGTTT GGTACAGAGC AGTGGACCCA ATTGGGAACT CCCATTAGGA AGAAAGGACA AGACTGCGAA CCTGAGTGGC TCAAACAACA ACATTCCCAC TCTCAACTCT ACTATCCAAA  ACCTCATAAC ATTTTTCAAG CGTCAAGGCC TTAATGAGGT CGACCTTGCT GCTCTCTAAG GTTAGAACAC ATACACATCC TTCAGCTATC GTTAGTATCT GTTTCCCATC CCTTCAGAAC  AAAGACACAT TAATAATTAT TCTGAATCTT TTGATTAATT TGAAAAATGC CATGTTGGAG GGCATACAAT TGGGGTGGCA AGGTGTGTGA CCTTCAAACA GAGACTGTAA AACCAAAATG  GAAACAACCA ACCAGATCAG ACTCTAAAGA AAAACTATTT CTTAGATCTG AAGTCAGTAT GTCCAAGATC AGGTAGAGAC GATAACCTTT CTCCTTTGGA CTTGGCCTCT TCAGCAAAAT  TAGACAACTC TCACTTCAAG CTCTTACTTT GGGGCAAAGG GCTTCTCACT TCTAATGAAG TGCTTTATAC AGGAAAGGAT GGCAAGACTA TTCAGTTGGT TAAGAGAAAT GCTGAAGATG 
AGGGCCTGTT CTATGAGCAT TTTGCCAAGT CTATGGTTAA GATGGGAAAC ATTAGCCCTC TTACAGGTTT TAATGGTGAA GTTAGGAGGA ATTGTCGCCT TGTTAAT 

Retrieve as FASTA