Entry information : PatrPrx24
Entry ID 3210
Creation 2006-08-10 (Claudia Cosio)
Last sequence changes 2010-07-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-07-07 (Christophe Dunand)
Peroxidase information: PatrPrx24
Name PatrPrx24
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus alba x Populus tremula var. glandulosa    [TaxId: 153471 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PatrPrx24
start..stop
S start..stop
PalPrx02 666 0 7..343 1..337
PtPrx33 663 0 1..343 1..343
PtPrx22 658 0 1..343 1..343
PnPrx02 657 0 1..343 1..343
Literature and cross-references PatrPrx24
Literature Lee,H., Lee,J.S., Noh,E.W., Bae,E.K., Choi,Y.I. and Han,M.S. Generation and analysis of expressed sequence tags from poplar (Populus alba x P. tremula var. glandulosa) suspension cells. Plant Sci 169 (6), 1118-1124 (2005).
EST ref. GenBank:   CX658380.1 [5' end]
Protein sequence: PatrPrx24
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   343 (321)
PWM (Da):   %s   36316.89 (34030.6) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.07 (3.98) Peptide Signal:   %s   cut: 23 range:23-343
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHLSKAIVAA FFFVVLLGGT LAYGQLTPTF YDQTCPNVST IIRDVITETL VSDPRIGASL IRLHFHDCFV NGCDGSLLLD NSDTIVSEKE AGGNNNSARG FEVVDRMKAL LESACPATVS  CADILTIAAE ESVVLAGGPN WTVPLGRRDS TTASRDAANA FLPPPTLTLD QLRESFTNVS LNNNSDLVAL SGAHTFGRAK CSTFDFRLYD FNSTGAPDPS LDPTLLAALQ ELCPQGGNGS 
VITDLDLTTP DAFDSNYYSN LQGNQGLLQT DQVLFSTPGA DDVIALVNAF SANQTAFFES FVESMIRMGN LSPLTGTEGE IRLNCSVVNT NLAGPDSMLV SSI 

Retrieve as FASTA  
Remarks Complete sequence from 14 ESTs.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATTTTGAAAA ATGCATCTTT CTAAGGCTAT AGTTGCAGCT TTTTTCTTTG TAGTTTTGCT TGGAGGAACA TTGGCTTATG GCCAGCTTAC TCCAACATTT TATGACCAGA CATGTCCAAA  TGTGAGCACC ATTATCCGTG ATGTCATTAC GGAGACACTG GTATCCGATC CTCGGATTGG AGCCAGCCTC ATCAGGCTCC ACTTCCATGA CTGCTTTGTT AATGGCTGTG ATGGTTCGCT  TTTGTTGGAC AATTCTGATA CAATAGTGAG CGAAAAGGAA GCCGGAGGGA ACAACAACTC TGCAAGAGGT TTTGAAGTTG TTGATAGAAT GAAGGCTTTG TTGGAGAGTG CCTGTCCTGC  TACTGTTTCC TGTGCTGACA TACTCACTAT TGCAGCTGAA GAATCTGTTG TCTTGGCAGG AGGTCCAAAT TGGACAGTTC CATTAGGAAG AAGAGATAGC ACAACAGCAA GCCGAGATGC  AGCAAATGCT TTCCTTCCAC CCCCTACTCT CACCCTTGAT CAACTCAGAG AGAGCTTCAC TAATGTCAGC CTCAATAATA ATAGTGATTT GGTAGCTCTA TCTGGTGCTC ACACATTTGG  GAGGGCAAAA TGCTCTACAT TCGACTTCCG ATTGTATGAT TTCAACAGCA CCGGTGCTCC TGACCCGTCA CTGGACCCAA CTCTTCTAGC AGCTCTTCAG GAATTATGTC CCCAAGGTGG  AAATGGGAGT GTGATAACAG ATCTTGATCT CACAACACCG GATGCCTTTG ACAGTAACTA CTACTCCAAT CTGCAAGGTA ACCAAGGCCT GCTTCAGACG GATCAAGTAC TGTTTTCAAC  TCCTGGGGCA GATGATGTCA TTGCACTTGT TAACGCTTTC AGTGCTAATC AAACAGCTTT CTTTGAAAGC TTTGTGGAGT CCATGATAAG AATGGGAAAT CTCAGCCCTC TGACAGGAAC  TGAAGGAGAG ATCAGGTTGA ACTGCAGCGT AGTCAATACA AACTTGGCTG GGCCAGATAG CATGCTTGTT AGCTCAATTT GAATGATAGG CTACATGCCA AGAAGCAGGT GATAATAAGC 
GATCCTATGC ACTGTAATAA ATATCAGAGT GATGAAAAAT GAATACCAAA TGGAGTCTTG TTGACATTTT TCTCGCACGC T 

Retrieve as FASTA