Entry information : BoPrx37_other
Entry ID 3235
Creation 2006-06-01 (Christophe Dunand)
Last sequence changes 2006-06-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2006-06-01 (Filippo Passardi)
Peroxidase information: BoPrx37_other
Name BoPrx37_other
Class Class III peroxidase     [Orthogroup: Prx018]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx37_other
start..stop
S start..stop
BrPrx37-1Aa_other 311 1e-106 81..242 191..352
BrPrx37-1Aa_other 141 1e-40 1..84 1..84
TsPrx37 286 6e-97 81..242 192..353
TsPrx37 107 1e-27 1..130 1..123
CagraPrx10 281 7e-96 81..242 115..276
CrubPrx47 280 1e-94 81..242 184..345
CrubPrx47 120 1e-32 11..84 2..77
Literature and cross-references BoPrx37_other
Literature Delehaunty,K., Fewell,G., Fulton,L., McCombie,W.R., Miner,T., Nash ,W., Rabinowicz,P.D. and Wilson,R.K. Whole genome shotgun reads from Brassica oleracea. Unpublished (2002)
DNA ref. GenBank:   23411631
Protein sequence: BoPrx37_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   242 (213)
PWM (Da):   %s   26781.38 (23678.8)  
PI (pH):   %s   7.41 (6.51) Peptide Signal:   %s   cut: 30 range:30-242
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRSSSSSSFD STTLIKLGFL LIHVSLSHAQ LSPSFYDKTC PQVFDIATNT IVNALRTDPR IAASILRLHF HDCFVxxxxx DLILALWWNS NSTNQCRFIM DRLYNFSESG SPDPTLDKSY  LSTLRKQCPR NGNQSILVDF DLRTPTVFDN KYYVNLKENK GLIQSDQELF SSRDASDTIP LVRAYADGQD KFFNAFVEAM KRMGSLSPLT GKQGEIRLNC RVVNSKSKIM DMVDDNEFVS 
YM 

Retrieve as FASTA  
Remarks Partial sequence from 2 GSS: BH470638 (exon 1 and intron 1 (388)), BH931565 (exon 4). No overlap between the two sequences.