Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
170 (345) |
| PWM (Da): |
19144.85 (36622.9) |
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| PI (pH): |
9.36 (5.25) |
Peptide Signal: |
cut: 29 range:21-365 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
KQAEAIVNSW RRFEVIDRIK YLLEEACPLT VSCADILAIA ARDAAAAIHI PSREVHRGRK DSLKSSSDRA DQFIPAPNSS LETLIANFKQ QGLDIGNLVA FSGSHTMGKA RCLSFRQQIH
DENAEEHCDK YKRYTPFRRI LRSICPKPRK DSQLAPLDCK TPARFDNKYF
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Retrieve as FASTA
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| Remarks |
Partial sequence from genomic (chromo 3). Exons 1 and 4 are missing. Frame shift. |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AAGCAAGCAG AAGCTATCGT AAACTCATGG CGTAGATTTG AAGTCATTGA TAGGATTAAG TATCTATTAG AAGAAGCATG CCCCCTCACA GTGTGCAGAT CTGAATTAAG CTTAAGACAG
AACTATAAAT GAACCTTTTA AAATATTTAA GAAATATTTT TTTATTTTTT ATGTATGTCT GGCAAGTAGA GGACTTTGCG CAATTTTCAT TCCATTCTCG GGGATCTTTT GTTAAGTAAA
GAAAATCTTA TACCTGACTT GTTTTTTGTA GCTTTTTGTT AAATAGAAGC CTTGGACCAT TGTCCAAATG ACCTAAGCTT AAACCTGCTC TAACAGTATC ATGTGCTGAT ATTTTAGCCA
TTGCTGCTCG TGATGCTGCT GCAGCGATAC ATATGCAAGT ATACCTCTAT CTCTTTCTTT CATCTTACTG TCTTATTATA AACTCCATAT GTGCCTTCAA TATCATAAAT GGTGAGAAAG
ATGGTCATTC GTATGTCACA ACTAATTCCT CGATGACATT AATTTGTTGA GATAAACTAA TTAATTTCTT AATACAATTG ATAATTGCTC ATGTCTTTCA GCTTGGCAGC CCAAGTCGGG
AAGTTCATCG AGGCAGAAAG GACTCCCTGA AGTCAAGTTC TGACCGCGCC GATCAGTTTA TCCCTGCACC AAATTCCTCT TTGGAGACTC TAATTGCCAA TTTTAAGCAA CAGGGTCTTG
ACATAGGAAA CTTGGTTGCT TTCTCAGGTA GAATTCTGAC AACCCTTTAA AGAATTATTT TTATAGTATT TTTTTTTAAT AGTACGGTCA CTGGATTAGG TTAAAACCAT AGTTTTGAAA
CCCGATCCGG TGGTCGACCC GGTCTAATGA CCGGGTCACG GGTCAGATGG GGTGACCCGG GTCAACCCAA AAAAAAAACT AGCAAGCAGA AGGGGTATTG AATTCAAGTC CGGGCCTTGG
ATGTTTAAGA AAAATCGATA CATTGACTTC TCAGTGGCGC TTAGAGCAAA GTGATCATGA AACATGTGTG GGCCATTCCC CAGCGTGGCT GATCTTTCAT GTTCTCTTCC ATAAGCATCT
GGCTCATTCC CCAGCGCGCG CACACACACA GAAGAAAGAA AAAAAAATAG AAAACCCAGA GAGCAAGAGA GAAATTAATT AACTTTTCTC AGTCATTGTG ATCTCAAACG TGAACAGTTT
CCTTCTTCAG CAGTAAGCAG CCTCTATCAA CCGTGAGCTT CAATCACGCC AATAATAGCA TGAGTTCATC CCCAAGCATC AACAACTTTG CTTTCAACTA AGAATCTCAT CCCCAACATT
GGTTTTGGTC AAGATCAGCG GCAGCTCAGC CTCAGCCATA TCTATCAACT GTGAGCCTCA ATCACATGAC CTTAGCGCGT CTCTTTTCGT TCTCTTTCCT GTCCGTGAAG GTGGATCAAA
GAAAGGCATC TTGCTTCTCT CCTGGAGATC CACTTTTCCG ACTAATGACA GAGCCCCCCC GGCTAGGAGG CATTTATTCA TCTTCATCAT TTAAAACGAT GTAGTTTAAT GTGTCTGTAT
GAAAAAAAAA AGAAAAAAAA AAGAGAGAGA GACCGGGTCT CAGCCGGGTT TACCCGGGTC GCCTGGGTTC CGGGTCGACC CGCCTGGTCG ACCGGGTTTT TCCGGGCCAA CTTCCAGGCG
GGTTTTTACT TAGACCCGGA CCGGTCCCAG GCCCGGGTCG GCCGGGTCCC GGGTCGACCC GCCGGGCCGG TCCAGGTTTC AAAACTGTGG TTAAAACACG GGCTAAGCTC AGTCAGTTAC
CGACAACTTC AAGATTAAGT GTTACGATTC AGGAAAGGTA AATTCGGATT TTGATGTAAG AAATGCATTT ATTCAGTTTT ATAGCAACAG TTATAATTTT TAATCCGATT GTTGGATCGG
GCTAAAATTT TACGTGGAGT TTCTTGACAT GGTATCCTAC CTTGAGTTAA AATTTCAGGT TAATCGGAGT CAAAAAGGCA TCGAAACACG GGTCAACAGA GGTTGTACGA ATTTTGTTAT
TTACTTCCTT TTGACTTGTG GACTTTCTAT TTGGCTGGGA AAGAAGACTT CAGAATAACT TCTACCTTTA GATCAGATTT CATAGTCTAT TTGAGGACTT CTTAATGGTG ACAAATCTGA
TTCTAGCATA TTTAGGATGG TAATTTTTGG ATTTTTATTA TTTTTATTAT TTTCTTCTTA GTCTTTGGGT TATTATTACT TATTTGGGTT AATTGTAAGT GGGTTTAATA TAAGTCCACC
TAAGGGGGGT CCATTAGGGT TTATTTAAGT CTAGAGTTAG TATAAATAAA GGCATAACCA GACATGTAAA TTAGACAATT CAGATTAATA AAACTTATTG TTTGCCACAC ATTGTGTGTG
TGTGTTGGTG AGATAATCTC TCTTCCATGG TTCTCTAATT AAATGAAAAA CGACTTATCA AAGAACAACT ATCTTTGTGG CGTCATCCTT ATACTTCTCG TTCGCGAATC AATATTCATT
GGGTGGGGGT TTCCGTTTCC AATAGTGCTG GTGCATAGGT ACAAGTTATC TTTGTGTCAC ACTCCTATCA AACCTTATTT ACTTGGCTTT CCGGGAATTG GTGTCTTTGC GTGTGGGTTG
CGTGACCATG TCTGGGTTTT ATAGTATTTT TTTTTAACAG TACGGTCACT GGATTAGGTT AAAACACGGG CTAAGCTCAA TCAGTTACCG ACCACTTCAA GATTAAGTGT TGAACTACTT
AAACCGAGGC AACTAAGACC AGACAGGAAA AAAAAATACA TCGGATCCAG GAGCATGCAA GTCCAGACCA TATTCCTAGC AAAGGACAGA GGCTGACCAG GAAAAGAAGA AGAAAAGAAA
AACGAACAAA ATGCACAAGG ATAATATATA CCACTAGAAT TCAATCAAGC CCTTTATAAT TTTTGTATGA TTTCCAAGAG TAAATATTTT TTTTCCTAAA ATTATATAAA TACCAGTAAA
AACATAGGAT GGTGACAATT GCTTGATATC CCATTATTTA ACAAGTCGTG GGGTTCCGAC TTCCGAGTAT TTGTTAGTTA AAGTGTATAT CCTTTTAATA TATATTTTGT CTTTTAGGGT
TTTTTTGTTT TTTTATTTAA TTTTTTTTTT ACTTTAAATG ATGCAAAATA CTAATATACA TATATACCTA CGGAGAGATT ATTAGGCAAC TTATGCTGCT CCCTAGCTAC CTCAAAATGG
TGCTGTAACT TTCAAGAAAT AATTTAGTAC CAAAAAACAA ATCTCAATAA ATTATACTAA AAATGAATTC TCGAATATAT TGTGCTTGTG CATGAGGTAG CCATACAATG GGGAAGGCAA
GATGCTTAAG CTTTAGGCAA CAAATACACG ATGAGAACGC TGAAGAACAT TGTGATAAAT ACAAGAGATA TAACTCCCTT TCGAAGAATC CTACGGTCCA TATGTCCAAA ACCTAGAAAA
GACAGTCAAT TGGCTCCGCT TGATTGTAAA ACCCCAGCTA GATTTGACAA TAAGTACTTT
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AAGCAAGCAG AAGCTATCGT AAACTCATGG CGTAGATTTG AAGTCATTGA TAGGATTAAG TATCTATTAG AAGAAGCATG CCCCCTCACA GTATCATGTG CTGATATTTT AGCCATTGCT
GCTCGTGATG CTGCTGCAGC GATACATATC CCAAGTCGGG AAGTTCATCG AGGCAGAAAG GACTCCCTGA AGTCAAGTTC TGACCGCGCC GATCAGTTTA TCCCTGCACC AAATTCCTCT
TTGGAGACTC TAATTGCCAA TTTTAAGCAA CAGGGTCTTG ACATAGGAAA CTTGGTTGCT TTCTCAGGTA GCCATACAAT GGGGAAGGCA AGATGCTTAA GCTTTAGGCA ACAAATACAC
GATGAGAACG CTGAAGAACA TTGTGATAAA TACAAGAGAT ATACTCCCTT TCGAAGAATC CTACGGTCCA TATGTCCAAA ACCTAGAAAA GACAGTCAAT TGGCTCCGCT TGATTGTAAA
ACCCCAGCTA GATTTGACAA TAAGTACTTT
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Retrieve as FASTA
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