Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
952 |
PWM (Da): |
107634.11 |
Transmb domain: |
o390-412i531-553o573-595i754-771o |
PI (pH): |
8.9 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MKLSPLSFSTSSSFSHADGIDDGVELISSPFAGGAMLPVFLNDLSRNSGESGSGSSWERELVEVTLELDVGDDSILVCGMSEAASVDSRARSVDLVTARLSRNLSNASTRIRQKLGKLLR SESWKTTTSSTAGERDRDLERQTAVTLGILTARDKRKEDAKLQRSTSSAQRALKGLQFINKTTRGNSCVCDWDCDCDQMWKKVEKRFESLSKNGLLARDDFGECVGMVDSKDFAVSVFDA LARRRRQKLEKITKDELHDFWLQISDQSFDARLQIFFDMADSNEDGKITREEIKELLMLSASANKLAKLKEQAEEYASLIMEELDPENFGYIELWQLETLLLQRDAYMNYSRPLSTTSGG VSTPRRNLIRPRHVVQKCRKKLQCLILDNWQRSWVLLVWVMLMAILFVWKFLEYREKAAFKVMGYCLTTAKGAAETLKLNMALVLLPVCRNTLTWLRSTRARACVPFDDNINFHKIIACA IAIGILVHAGTHLACDFPRIINSSPEQFVLIASAFNGTKPTFKDLMTGAEGITGISMVILTTIAFTLASTHFRRNRVRLPAPLDRLTGFNAFWYTHHLLVVVYIMLIVHGTFLFFADKWY QKTTWMYISVPLVLYVAERSLRACRSKHYSVKILKVSMLPGEVLSLIMSKPPGFKYKSGQYIFLQCPTISRFEWHPFSITSAPGDDQLSVHIRTLGDWTEELRRVLTVGKDLSTCVIGRS KFSAYCNIDMINRPKLLVDGPYGAPAQDYRSYDVLLLIGLGIGATPFISILKDLLNNSRDEQTDNEFSRSDFSWNSCTSSYTTATPTSTHGGKKKAVKAHFYWVTREPGSVEWFRGVMEE ISDMDCRGQIELHNYLTSVYDEGDARSTLIKMVQALNHAKHGVDILSGTRVRTHFARPNWKEVFSSIARKHPNSTVGVFYCGIQTVAKELKKQAQDMSQKTTTRFEFHKEHF* |
Retrieve as FASTA
|
|
Remarks |
One EST which matches to the last 10 AA (AV556868). Seed proteome. |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTCAATGTTA CAAGCCAGCT TCTATCACTT TCCCTAAAGT GAGATTCAAA TCCAGCCCGC CATTATTTTT TTTCACACTA ACTTCACAGT CACTTAGCAA AGTAGATTAT ATACACTATG
TTAAAAAAGG AAACATTGTC TTGCCTGTTT GTATAGACCC CGCCTAAAGG CATGAAAATA ACAAATCTAA GTTACTATAC GAAATAATAT ACGTGTCTTT CCCAAGATGA TTCAATCTCT
CTTTCCATTA CCACAAGCTA CTAGTCACAA AGGCAGAGAA GCAAACAACA AATTTTCATT GATAAGGTGC CTCAGCACAG TATATTGGTA CTAAAACACA TTCAAGGATA AGAATAGAGT
AATGCCTTTG TGCTAAGTGT ACCAAAACTT GCAGTAGAAG ACGAGGTTGG AGTTAATCAT CCTTTATTCT TCTCAGTAAT TTAGAAGCCC AGCGTCGAAC CCGTCTCTTA AGTGTATAAC
CCACAAACAC TCCAGCGACA AAGAAAACAG CGCACAACTT TGAACACGTC CAGACCGAAA CTCCGCTGCC ACCAAACACA GTCCCAAGAT AGGTCAGATA ATTTTCTTAA ATTAGAACTA
ATAGTACACA AAACACGTAA AGCCATTACA TATTAGTCGA ATCAATCAGA AACAACCCAA AGCTCCTACT AGATAGTCTA TAATCGACCT GCACAGTTTT GTTCCTCGGG TATCTAAGAT
CTTAGATCAT TTGAACAAGC CATTACAAAT TTACAAGCTC TGTGTGATGT GGAACTGGGA AATCATCATG GTCTCTAGGT TTTGAGCTAT AACACAAAAT CTGCCCTCTT TTTCATTTTT
GTTCCATCTT TTTAAAATTT CTCTCAAGCA GGCAGACCAA TTCATAATCC ATCCACAGAA ATAGTGATTA TTATTATCAT CCTTCCCATA ATTAGAGAGA ATCTGAAAAA TTGGAGACAT
GCCCTCACTC ACTCACCCAA AATTCTTAAA AGTTCTTAGC
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAAGTTATCGCCTCTGAGTTTCTCTACGAGTTCGAGTTTCAGTCACGCCGATGGAATCGACGACGGTGTTGAGTTAATATCATCTCCATTTGCCGGCGGCGCAATGCTGCCGGTTTTT CTCAACGATTTGAGTCGTAACAGTGGAGAATCCGGAAGCGGTAGTAGCTGGGAAAGAGAGCTCGTGGAGGTTACGTTAGAGCTCGACGTCGGCGATGACTCCATACTCGTCTGCGGAATG TCTGAGGCGGCGTCTGTTGATTCTCGGGCGAGATCGGTGGATTTGGTAACCGCGAGGTTATCGAGGAATTTATCGAATGCGTCTACGAGAATCCGCCAGAAACTAGGGAAGTTACTGAGG TCGGAATCGTGGAAAACGACGACGTCTTCTACCGCCGGCGAGAGAGATAGAGATCTTGAACGTCAGACGGCGGTGACTTTGGGGATTCTGACGGCGAGGGATAAACGGAAAGAAGACGCG AAACTACAGCGATCAACGTCGAGTGCGCAAAGAGCGTTAAAAGGATTACAGTTTATAAATAAAACCACGAGAGGAAATAGCTGCGTCTGCGATTGGGATTGCGATTGCGATCAGATGTGG AAAAAAGTTGAAAAGCGATTCGAATCGCTTTCTAAAAATGGATTACTCGCCCGAGACGATTTTGGCGAGTGCGTTGTGGTAAGTCAATAAATATCTATATATACATACGAAAATGATCAT GGACCAATCCACTGTTTTGTAAATTTAAAGGGATGGTGGATTCGAAGGACTTTGCGGTGAGTGTATTCGACGCGTTGGCTAGGAGAAGAAGACAGAAACTGGAGAAGATAACGAAAGATG AACTTCATGATTTCTGGTTACAGATTTCTGACCAAAGCTTCGACGCACGTCTTCAAATTTTCTTCGACATATGTACGTGTCTCTTTGATTCTCTCTTTCTTTTTATTTTTAAGTCAAGTT TTTGGGTTTGTCTTTACGTTTATAACTGTTACGGGAATAACGCACTGCAATTAGCAAAAGCATAAGAAAACAAATGTATTGATCCAAGTGCAACGAATAATTCAGTTGACGTTAATAATT GAAGAAAGTTTTATCTATAATTGATATTCCAAATTCTGAATAACGCCGGCGAGGTCTCATCAACTTGCATTTTAATAAGATTTGAGTTGATTTTTGTTTTCTGGTGGTATTTTATGAAGT TTAGCTGATTAAATTCACTTATTGAGTAAAAATGTTGTTGATTAAAGATAATGTTAGCTTACCAATCATTCTTTGATTGTAATTTGTTATCTCTTTAGTGAGAACTACCGCAACTTCACA ATAATTTTCTACAATTTTGGGAATTATTAGCCTTAAATAAAATAACATGTGTTGGTTAAGAACTTAAGATGAATTGTGATTGTTTTTAAAACCAAATATCATATCCTTGTAGAGAGATAT AGATAGATACATCATTTAAATCACGTGGTGTTCTTAGCCGTTGGATCTGGTAGTTCACGCAATCAATGGCGAAAATGGTCTAGTGAGTTTAAGTAATGGGCCGCGGTTTACTTGGCCCAG TAAAAAATAAACTTTTACCAAATTTTCAAAAAGTTTCCTCTTTCAGCTTTCTTTTTCCCGCAATAAGTTTCTTGCAAGTATAAGATACAATGACTCTTATATACACCAAGCTGCCAAAAT GAGTTTGCAATTTTTTACTCTTTTTATGGCCAAACATTTAATTCAGTAACATTATGGTTTACACTCAACTCGTTTTGTTATTCTGTCATTTTTATGACATAACTAAATATATTTTGTTGT TTAATGATTCTACAATTCTGTTATAATTTGTAGTGTTACTGAAAGAAAAAAAAAGATTCTAACTGGTACCGGTTTTTTGTTACAGGGCTGATAGTAACGAAGACGGGAAGATCACTAGAG AAGAAATCAAAGAAAAGTAACTTTCTTTATTCTTCAACATAGAGATTACGTTTAAAACAATCAATCTCTTTAACAACTCTTGTACTTTTGAAACGCAGCTTCTAATGCTAAGTGCATCAG CAAACAAGTTAGCAAAACTCAAGGAACAAGCTGAAGAGTACGCATCTCTGATCATGGAAGAGCTTGATCCTGAGAATTTTGGATACATTGAGAGGTTCAAAAAAACATAATATATTCGAA CACACAATCAACGATTCTTTTATGTTTCTTAACTTTTTTGTGTTGTCTCAGTTATGGCAACTCGAGACACTCTTACTTCAGAGAGACGCATACATGAATTACAGTAGACCACTTAGCACA ACAAGCGGTGGAGTAAGTACACCAAGACGGAATCTAATAAGACCTCGTCATGTGGTTCAAAAGTGTAGAAAAAAACTTCAATGTCTGATTCTAGATAACTGGCAAAGAAGCTGGGTTCTT TTAGTGTGGGTCATGCTTATGGCCATCCTCTTTGTCTGGAAGTTTCTAGAGTACAGAGAAAAAGCTGCGTTTAAGGTCATGGGGTATTGTTTAACCACTGCTAAAGGAGCTGCAGAGACT CTTAAGCTCAACATGGCTCTGGTTTTATTACCTGTCTGTAGAAACACATTGACTTGGCTAAGATCTACACGCGCTCGAGCTTGTGTTCCTTTTGATGACAACATCAATTTCCATAAGAGG TACCTTCCTTCAGTCTTTCGATTTTTCAGTTTTAGTCAGAGCACAACATTTGAGATAAACTCTTTCTCTCTCTCTTGTCCTGTTTGTGTGCCAGATTATTGCTTGTGCCATAGCGATTGG GATACTTGTTCATGCTGGTACTCATTTGGCGTGTGATTTCCCCCGGATTATAAACTCGAGTCCAGAACAATTTGTCTTGATCGCTTCTGCCTTCAATGGTACTAAGCCTACATTCAAAGA CCTGATGACAGGTGCAGAAGGAATCACCGGGATCTCGATGGTGATCTTGACAACCATTGCATTCACATTAGCATCAACTCATTTCAGGAGAAACCGTGTGAGGCTTCCGGCACCACTTGA TCGGTTGACTGGCTTTAACGCATTCTGGTACACTCATCACCTTCTAGTGGTTGTCTACATCATGCTCATTGTCCACGGGACCTTCCTGTTCTTTGCTGATAAGTGGTATCAGAAAACGCG GTAAGCAGCAGCAACCATAATCTCTCTTTACTTTAAACCGAAAAACCAAATGTCCTGAAACCTAAATTATTGTTGATTACCACTGTTCCCAGACTTGGATGTACATCTCGGTTCCTTTGG TGCTCTACGTGGCAGAACGAAGTCTGCGAGCTTGTAGGTCAAAGCATTACTCTGTCAAAATCCTCAAGAGGCAACCACCATAAACCGAGCAAATTCATTCCTGTTAAAAGGTGTTTTAAT AACAAAATAAACCCATGAACCTTCAATCTGATCTCTGCAGGTTTCCATGCTACCTGGAGAAGTACTCAGCTTAATCATGTCAAAGCCTCCTGGATTCAAGTACAAGAGCGGTCAGTACAT ATTCTTGCAGTGTCCAACTATCTCTCGATTTGAATGTGGTGAGTACTGATACCGAATTCCCATAGTGTTAACAAACATCTCAGGTTTCACTCAGAAAGATATTCCCTAAACTTTTCCAGG CACCCATTTTCTATTACCTCTGCACCAGGAGATGACCAACTTAGTGTTCACATCCGAACACTCGGAGACTGGACAGAGGAGCTACGACGAGTTCTAACTGTGGGCAAAGATCTTTCAACA TGCGTGATTGGGCGTTCAAAATTCTCTGCCTATTGCAATATTGATATGATAAAAAGTAAATTTCAAGACATCTTTGCTTTCTCCTTACTCACTTGGATACCTATTATTAACATGGCTTGT TGATCCTGCACTGACAGCCGACCAAAATTACTAGTAGACGGTCCATATGGAGCTCCAGCACAGGACTACAGAAGCTATGATGTCTTGCTCCTCATTGGACTGGGAATAGGAGCTACTCCT TTCATAAGCATCCTGAAGGATCTGCTGAACAATTCAAGAGACGAACAAACACAGTAAGTCCAATTCAGTGCACCAGAAAAGTTAGTCTTTTCTAGAACCTTGCACCAAATACATATCTCT AAACTTCATATGGCACAGGACAATGAATTCAGCAGATCGGATTTCAGCTGGAATAGCTGTACATCTTCATATACCACAGCAACCCCAACTTCAACACATGGAGGGAAAAAGAAAGCAGTG AAGGCTCACTTTTACTGGGTCACAAGGGAGCCAGGATCCGTTGAATGGTTTAGAGGAGTAATGGAGGAAATATCAGACATGGACTGCAGAGAGTAATACTAAACACCAGCATATCATTCA TTTGCATCACCTCTTTACCATTGATCGATATACTAACATATTCCTTCATCTTCTCGTAATACAGGGCCAGATTGAGTTGCACAACTACCTTACAAGCGTATATGATGAAGGTGATGCAAG ATCAACCCTGATAAAAATGGTCCAGGCTTTGAACCATGCCAAACATGGAGTTGATATTCTATCCGGAACACGGGGGTAAGAATTGATGCAGGGCATATAACCAGAAACTATTTGCCAATA TTACCTATAACTGACAAAATAACATCATTCAAACAGGTGAGAACACATTTTGCAAGGCCCAACTGGAAGGAAGTCTTCAGTAGCATAGCAAGAAAGCATCCAAATTCGACAGTCGCGGTA ATTATTCTATACAATCAGCTGCTTACCATCAAGACATCTTATAAATCTCTCTTCTAGGACTAACGAATTAATACCATTGGAAAAGAAAGAAAACTTGCAATAGGAATTATGACACATGCA AACACATGAACATGTCTGCTAATATTTAGGCCAGGTATTACGAAGCATATGTGAAAACAATTTATATAATTGTGCAGGAGTGTTTTACTGCGGCATACAAACCGTGGCAAAGGAGTTGAA GAAGCAAGCACAAGACATGAGTCAAAAAACAACCACACGGTTCGAGTTCCATAAGGAGCATTTCTAA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAAGTTATCGCCTCTGAGTTTCTCTACGAGTTCGAGTTTCAGTCACGCCGATGGAATCGACGACGGTGTTGAGTTAATATCATCTCCATTTGCCGGCGGCGCAATGCTGCCGGTTTTT CTCAACGATTTGAGTCGTAACAGTGGAGAATCCGGAAGCGGTAGTAGCTGGGAAAGAGAGCTCGTGGAGGTTACGTTAGAGCTCGACGTCGGCGATGACTCCATACTCGTCTGCGGAATG TCTGAGGCGGCGTCTGTTGATTCTCGGGCGAGATCGGTGGATTTGGTAACCGCGAGGTTATCGAGGAATTTATCGAATGCGTCTACGAGAATCCGCCAGAAACTAGGGAAGTTACTGAGG TCGGAATCGTGGAAAACGACGACGTCTTCTACCGCCGGCGAGAGAGATAGAGATCTTGAACGTCAGACGGCGGTGACTTTGGGGATTCTGACGGCGAGGGATAAACGGAAAGAAGACGCG AAACTACAGCGATCAACGTCGAGTGCGCAAAGAGCGTTAAAAGGATTACAGTTTATAAATAAAACCACGAGAGGAAATAGCTGCGTCTGCGATTGGGATTGCGATTGCGATCAGATGTGG AAAAAAGTTGAAAAGCGATTCGAATCGCTTTCTAAAAATGGATTACTCGCCCGAGACGATTTTGGCGAGTGCGTTGGGATGGTGGATTCGAAGGACTTTGCGGTGAGTGTATTCGACGCG TTGGCTAGGAGAAGAAGACAGAAACTGGAGAAGATAACGAAAGATGAACTTCATGATTTCTGGTTACAGATTTCTGACCAAAGCTTCGACGCACGTCTTCAAATTTTCTTCGACATGGCT GATAGTAACGAAGACGGGAAGATCACTAGAGAAGAAATCAAAGAACTTCTAATGCTAAGTGCATCAGCAAACAAGTTAGCAAAACTCAAGGAACAAGCTGAAGAGTACGCATCTCTGATC ATGGAAGAGCTTGATCCTGAGAATTTTGGATACATTGAGTTATGGCAACTCGAGACACTCTTACTTCAGAGAGACGCATACATGAATTACAGTAGACCACTTAGCACAACAAGCGGTGGA GTAAGTACACCAAGACGGAATCTAATAAGACCTCGTCATGTGGTTCAAAAGTGTAGAAAAAAACTTCAATGTCTGATTCTAGATAACTGGCAAAGAAGCTGGGTTCTTTTAGTGTGGGTC ATGCTTATGGCCATCCTCTTTGTCTGGAAGTTTCTAGAGTACAGAGAAAAAGCTGCGTTTAAGGTCATGGGGTATTGTTTAACCACTGCTAAAGGAGCTGCAGAGACTCTTAAGCTCAAC ATGGCTCTGGTTTTATTACCTGTCTGTAGAAACACATTGACTTGGCTAAGATCTACACGCGCTCGAGCTTGTGTTCCTTTTGATGACAACATCAATTTCCATAAGATTATTGCTTGTGCC ATAGCGATTGGGATACTTGTTCATGCTGGTACTCATTTGGCGTGTGATTTCCCCCGGATTATAAACTCGAGTCCAGAACAATTTGTCTTGATCGCTTCTGCCTTCAATGGTACTAAGCCT ACATTCAAAGACCTGATGACAGGTGCAGAAGGAATCACCGGGATCTCGATGGTGATCTTGACAACCATTGCATTCACATTAGCATCAACTCATTTCAGGAGAAACCGTGTGAGGCTTCCG GCACCACTTGATCGGTTGACTGGCTTTAACGCATTCTGGTACACTCATCACCTTCTAGTGGTTGTCTACATCATGCTCATTGTCCACGGGACCTTCCTGTTCTTTGCTGATAAGTGGTAT CAGAAAACGACTTGGATGTACATCTCGGTTCCTTTGGTGCTCTACGTGGCAGAACGAAGTCTGCGAGCTTGTAGGTCAAAGCATTACTCTGTCAAAATCCTCAAGGTTTCCATGCTACCT GGAGAAGTACTCAGCTTAATCATGTCAAAGCCTCCTGGATTCAAGTACAAGAGCGGTCAGTACATATTCTTGCAGTGTCCAACTATCTCTCGATTTGAATGGCACCCATTTTCTATTACC TCTGCACCAGGAGATGACCAACTTAGTGTTCACATCCGAACACTCGGAGACTGGACAGAGGAGCTACGACGAGTTCTAACTGTGGGCAAAGATCTTTCAACATGCGTGATTGGGCGTTCA AAATTCTCTGCCTATTGCAATATTGATATGATAAACCGACCAAAATTACTAGTAGACGGTCCATATGGAGCTCCAGCACAGGACTACAGAAGCTATGATGTCTTGCTCCTCATTGGACTG GGAATAGGAGCTACTCCTTTCATAAGCATCCTGAAGGATCTGCTGAACAATTCAAGAGACGAACAAACAGACAATGAATTCAGCAGATCGGATTTCAGCTGGAATAGCTGTACATCTTCA TATACCACAGCAACCCCAACTTCAACACATGGAGGGAAAAAGAAAGCAGTGAAGGCTCACTTTTACTGGGTCACAAGGGAGCCAGGATCCGTTGAATGGTTTAGAGGAGTAATGGAGGAA ATATCAGACATGGACTGCAGAGGCCAGATTGAGTTGCACAACTACCTTACAAGCGTATATGATGAAGGTGATGCAAGATCAACCCTGATAAAAATGGTCCAGGCTTTGAACCATGCCAAA CATGGAGTTGATATTCTATCCGGAACACGGGTGAGAACACATTTTGCAAGGCCCAACTGGAAGGAAGTCTTCAGTAGCATAGCAAGAAAGCATCCAAATTCGACAGTCGGAGTGTTTTAC TGCGGCATACAAACCGTGGCAAAGGAGTTGAAGAAGCAAGCACAAGACATGAGTCAAAAAACAACCACACGGTTCGAGTTCCATAAGGAGCATTTCTAA |
Retrieve as FASTA
|
|