Entry information : PtroEPO
Entry ID 3367
Creation 2008-08-13 (Christophe Dunand)
Last sequence changes 2010-12-21 (Myriam Duval)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-12-21 (Myriam Duval)
Peroxidase information: PtroEPO
Name PtroEPO
Class Eosinophil peroxidase    [Orthogroup: EPO001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtroEPO
start..stop
S start..stop
GgoEPO 1457 0 1..715 1..715
HsEPO 1456 0 1..715 1..715
MmulEPO 1418 0 1..714 1..714
CjaEPO 1385 0 1..715 1..715
Gene structure Fichier Exons


exon

Literature and cross-references PtroEPO
Literature REFERENCE 1 Chimpanzee Sequencing and Analysis Consortium Initial sequence of the chimpanzee genome and comparison with the human genome Nature 437 (7055), 69-87 (2005).
REFERENCE 2 Zamocky M. et al. (2007) Phylogenetic relationship in the peroxidase-cyclooxygenase superfamily (in preparation).
DNA ref. GenBank:   NC_006484.2 (57363864..57375079)
mRNA ref. GenBank:   XM_523809
Protein sequence: PtroEPO
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   715 (693)
PWM (Da):   %s   80890.13 (78677.9) Transmb domain:   %s   i5-22o
PI (pH):   %s   10.81 (10.90) Peptide Signal:   %s   cut: 23 range:23-715
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MHLLPALAGVLATLILAQPCEGTDPASPGAVETSVLRDCIAEAKLLVDAAYNWTQKSIKQRLRSGSASPMDLLSYFKQPVAATRTVVRAADYMHVALGLLEEKLQPQRSGPFNVDVLTEPQLRLLSQASGCVLRDQAERCSDKYR
TITGRCNN
KRRPLLGASNQALARWLPAEYEDGLSLPFGWTPSRRRNGFLLPVRAVSNQIVRFPNERLTSDRGRALMFMQWGQFIDHDLDFSPESPARVAFTAGVDCERTCAQLPPCFPIKIPPNDPRIKNQRDCIPFFRSAPSCPQNKNRVRNQINALTSFVDASMVYGSEVSLSLRLRNRTNYLGLLAINQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSTETPKLAAM
HTLFMREHNRLATELRRLNPRWNGDKLYNEARKIMGAMV
IITYRDFLPLVLGKARARRTLGPYRGYCSNVDPRVANVFTLAFRFGHTMLQPFMFRLDSQYRASAPNSHVPLSSAFFASWR
IVYE
GGIDPILRGLMATPAKLNRQDAMLVDELRDRLFRQVRRIGLDLAALNMQRSRDHGLPGYNAWRRFCGLSQPRNLAQLSRVLKNQDLARKFLNLYGTPDNIDIWIGAIAEPLLPGAR
VGPLLACLFENQFRRARDGD
RFWWQKRGVFTKRQRKALSRISLSRIICDNTGITTVSRDIFRANIYPRGFVNCSRIPRLNLSAWRGT

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 17, 11 introns) and mRNA. No EST available.
DNA
Send to BLAST
CDS
Send to BLAST