The peroxidases and oxidases database
Entry information : CsAPx02 (orange1.1g025588m)
Entry ID 3422
Creation 2006-07-28 (Felipe Teixeira)
Last sequence changes 2011-07-01 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: CsAPx02 (orange1.1g025588m)
Name (synonym) CsAPx02 (orange1.1g025588m)
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation Cytosolic
Tissue types Fruits
Whole plant
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsAPx02
start..stop		 S start..stop
CclAPx05 511 0 1..250 1..250
PtriAPx02 506 0 1..250 1..250
CroAPx02 491 3e-179 1..250 1..250
PtAPx02 478 4e-174 1..249 1..249
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 23610..23728 119 N° 2 23871..24045 175 N° 3 24163..24228 66 N° 4 24757..24805 49
N° 5 24909..24991 83 N° 6 25127..25206 80 N° 7 25330..25432 103 N° 8 25526..25584 59
N° 9 25692..25710 19  
join(23610..23728,23871..24045,24163..24228,24757..24805,24909..24991,25127..252 06,25330..25432,25526..25584,25692..25710)


exon

Literature and cross-references CsAPx02 (orange1.1g025588m)
Literature Uratsu,S., Baek,J., Leslie,A., Xu,J., Cook,D. and Dandekar,A. Analysis of peel specific genes in Citrus (2004). Unpublished (2004)
DNA ref. Phytozome 12:   scaffold00115 (23610..25710)
Cluster/Prediction ref. UniGene:   Csi.4283
Protein sequence: CsAPx02 (orange1.1g025588m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250
PWM (Da):   %s   27555.97  
PI (pH):   %s   5.57
Sequence 292
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGKCYPKVSDEYQKAVEKCKRKLRGLIAEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIEQQFPILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPPPEGRLPNATKGSDHLRDVFGHMGLSDKEIVVLSGGHTLGRCHKERSGFEGPWTNNPLIFDNSYFKELLSGEKEGLLQLPSDKALLEDPVFRPLVEKYAADEDAVFADYAEAHLKLSELGFADAE*

Retrieve as FASTA  
Remarks Complete sequence from genome and 14 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAAAGTGTTATCCAAAAGTGAGCGATGAGTATCAGAAAGCAGTGGAGAAATGCAAGAGGAAACTCAGAGGACTCATTGCTGAGAAACACTGTGCCCCTATCATTCTTCGCTTGGCG
TAAGTTTATCTTTAACCTTTCTTAATTAAGATCACTTTCAGTGACCACCGTTGATGCGTTATTAATCTGCATGATGATGAGTATTGGATCAAAATCAAGATGTGTATATATATGTAAGTT
TTTTGGGTTGCACATATGCAGATGGCACTCAGCGGGGACTTATGACGTGAACACGAAGACAGGAGGGCCTTTTGGGACGATCAGGCACCCAGATGAGCTTGCTCATGAGGCTAACAATGG
TCTTGATATTGCTGTCAGGCTTTTGGAGCCCATCGAGCAGCAGTTTCCTATCTTGTCCTACGCTGATTTCTATCAGGTAATTATTATTTATATCCAACTGTTGACTACAGAAAATGATTT
GCTTTATGATCACTTTCTATGGATTACTTTGGATTGGTGAATTGACCATGGTTTGTGTTTTATTTTGTTGAAGTTGGCTGGAGTTGTTGCCGTTGAAGTTACCGGAGGGCCTGAAATACC
TTTCCACCCTGGAAGACCGGTGAGGGCTTTTTATTTTTTATTTTATTTCTTTTTTCATATGCATGTTCTCTAGCTCCCGAAAAAGACATTATACAGACTGGATTAAAATAAAATTTTGTT
GATCAGCATCTTGGACTAGGCATCACTTAGAAGGTTTTGTTAGAAGATCATCAATGCATAATTAAATAGACGTGAGTCACTTGCTGGGAACTCAGGGCCTTTACTTGACGTGTGTGATGT
GTATGTCATTCCTATTATGCATAATTTCTATTTATGTTACTGTCACTAGTGTACAATTATATTGATGTGTATTCATGTGTTTGATTTACAATTAAATGAATGAAAAGAATAATAATAACA
ATAAACTAAGGCATCCTCATTCTGTCGTCCATTTGGATTGTATTGAAGCAACAGAGAAAGCAACTAATCTATCCAAATAATACAGCTTGTTGATAGCTAAGCAATTTTAGAAGGCAGCAG
CGAAGATTGAACTATTGATGCTGAACTGGTATTCTTTATATTAAGTTCTAAACATCTGGTGTTGCAGGACAAATCTGATCCGCCCCCAGAAGGTCGCTTGCCAAATGCCACCAAAGGTCA
GTTTCAGATAATTTGCTCAGGTTTAAATCATTGTAAAATCAGTACAGTGTATCTTCCCACAAATTAAGTCACTTACTCCTTTTGTTATCATCACTGCAGGTTCTGACCATCTGAGAGATG
TCTTCGGCCACATGGGTCTGAGTGATAAGGAAATCGTTGTTTTATCCGGCGGTCATACATTGGTCTGTGAGCTAACATTACAATAGTTCTATATTCTTCCATGGACTGCTGCTTGTTTTT
GGAAGCACGATGCAATTTAACATCTTTAGCTTGTTGTACTGACTTGTAATGTTGGTCTCATGGGAATCCTTGTACAGGGTAGGTGCCACAAGGAGCGTTCTGGATTTGAAGGACCCTGGA
CTAACAATCCACTTATTTTTGACAATTCATATTTTAAGTAATAAGCACATTTATCATTCTTCGTACTTTCACAAGTTCTTTTTATATGGGGCCTCATTCAAATTTACGTGTCTCAGAGCA
ACAGACTGATGTGAATTATTTCATTATTTTAATTTGATAGGGAATTGCTGAGTGGAGAGAAAGAAGGTCTACTTCAGCTGCCATCAGACAAGGCTCTTCTCGAGGACCCAGTGTTTCGTC
CTCTTGTTGAAAAATATGCTGCAGTAAGTACCTGGCCATATTTTTATATTGATTTTATTTATGGAATTGGTCGCAATGTCTACGAAACTTACTGTGTTGTGGTGACATTGCTTCAGGATG
AGGATGCCGTCTTTGCAGATTACGCTGAAGCTCATTTGAAGCTCTCAGAACTCGGGTTAGTCTTCTATGACTTCTCTTCACCTATTACCTAGTCCTTTAATCATTTAATCATGCGTGCTT
CTACTTGAGTATTGACTTGTGAATTTCTATTTCCTCCTCCAGATTTGCGGATGCTGAGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAAAGTGTTATCCAAAAGTGAGCGATGAGTATCAGAAAGCAGTGGAGAAATGCAAGAGGAAACTCAGAGGACTCATTGCTGAGAAACACTGTGCCCCTATCATTCTTCGCTTGGCA
TGGCACTCAGCGGGGACTTATGACGTGAACACGAAGACAGGAGGGCCTTTTGGGACGATCAGGCACCCAGATGAGCTTGCTCATGAGGCTAACAATGGTCTTGATATTGCTGTCAGGCTT
TTGGAGCCCATCGAGCAGCAGTTTCCTATCTTGTCCTACGCTGATTTCTATCAGTTGGCTGGAGTTGTTGCCGTTGAAGTTACCGGAGGGCCTGAAATACCTTTCCACCCTGGAAGACCG
GACAAATCTGATCCGCCCCCAGAAGGTCGCTTGCCAAATGCCACCAAAGGTTCTGACCATCTGAGAGATGTCTTCGGCCACATGGGTCTGAGTGATAAGGAAATCGTTGTTTTATCCGGC
GGTCATACATTGGGTAGGTGCCACAAGGAGCGTTCTGGATTTGAAGGACCCTGGACTAACAATCCACTTATTTTTGACAATTCATATTTTAAGGAATTGCTGAGTGGAGAGAAAGAAGGT
CTACTTCAGCTGCCATCAGACAAGGCTCTTCTCGAGGACCCAGTGTTTCGTCCTCTTGTTGAAAAATATGCTGCAGATGAGGATGCCGTCTTTGCAGATTACGCTGAAGCTCATTTGAAG
CTCTCAGAACTCGGATTTGCGGATGCTGAGTAA

Retrieve as FASTA