Entry information : PpaPrx17 (PP00066G00100)
Entry ID 3428
Creation 2008-08-06 (Christophe Dunand)
Last sequence changes 2011-03-03 (Nizar Fawal)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-01-05 (Qiang LI)
Peroxidase information: PpaPrx17 (PP00066G00100)
Name (synonym) PpaPrx17 (PP00066G00100)
Class Class III peroxidase    [Orthogroup: Prx072]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation Apoplastic
Tissue type Gametophore
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaPrx17
start..stop
S start..stop
PpaPrx11 543 0 1..340 1..341
PpaPrx24 349 2.25e-120 19..340 9..330
PpaPrx25 336 3e-115 20..340 10..333
SmPrx35-1_84 323 2.99e-110 19..340 12..328
Gene structure Fichier Exons


exon

Literature and cross-references PpaPrx17 (PP00066G00100)
Literature Rensing,S. et al., The genome of the moss Physcomitrella patens reveals evolutionary insights into the conquest of land by plants. Science (2008)
DNA ref. Phytozome 12:   scaffold_66 (123609..125120)
Cluster/Prediction ref. UniGene:   Ppa.9422
Protein sequence: PpaPrx17 (PP00066G00100)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   340 (313)
PWM (Da):   %s   36130.84 (33255.3) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.13 (4.73) Peptide Signal:   %s   cut: 28 range:28-340
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAGLRYGRTNRATVAMASLLLAALVFQGHVQVGGVAVGFYDQTCP
QAESIVTQTVREFNSKDPTTPAALLRLLFHDCFVE
GCDASILLDATPQNPNIEKMAAPNLTVRGYEVIDGAKARLEAACPGTVSCADIVALAARDGAVLAGLNFEGRPLTMATGRWDGRVSSMSAAAAALPSSKSNVQQLTAQFGAKGLSQDEMV
TLS
GAHTIGKAHCVNFMDRLYDFPGSATGVDPTLDANYAAELQTQCPRGNPNQNTVVDLDPATPFVMDNNYYRNGFAGKVLFGSDMALFHDFETQFTSDLNVVNGVSWNQKFGNALAQMA
SIEVKDSTVGEIRLNCRRVN

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 2 ESTs. Incorrect prediction from Phytozome (shorter PS).
DNA
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CDS
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cDNA
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