Entry information : PpaPrx27 (PP00354G00130)
Entry ID 3438
Creation 2008-08-06 (Christophe Dunand)
Last sequence changes 2010-06-08 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-05 (Qiang LI)
Peroxidase information: PpaPrx27 (PP00354G00130)
Name (synonym) PpaPrx27 (PP00354G00130)
Class Class III peroxidase     [Orthogroup: Prx207]*
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation Apoplastic
Tissue type Protonema
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaPrx27
start..stop
S start..stop
SpolPrx05 273 8.57e-91 18..339 8..325
LminPrx18 272 2.04e-90 36..339 26..324
LminPrx46 271 4.05e-90 36..339 26..324
PatrPrx10 271 5.9e-90 10..340 1..329
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '3438' 'complement(join(269159..269577,269804..270149,270414..270683))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 270414..270683 268 N° 2 269804..270149 344 N° 3 269159..269577 417  
complement(join(269159..269577,269804..270149,270414..270683))


exon

Literature and cross-references PpaPrx27 (PP00354G00130)
Literature Rensing,S. et al., The genome of the moss Physcomitrella patens reveals evolutionary insights into the conquest of land by plants. Science (2008).
DNA ref. Phytozome 12:   scaffold_354 (270683..269159)
EST ref. GenBank:   FC341398.1 [5' end]
Protein sequence: PpaPrx27 (PP00354G00130)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   344 (310)
PWM (Da):   %s   37695.09 (35101.0) Transmb domain:   %s   i9-31o
PI (pH):   %s   8.4 (7.80) Peptide Signal:   %s   cut: 22 range:22-331
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARIHRDVSVLGSMALVALCLYCGVAGAVLNYTPGLRYDFYKNSC
PRADDIVFEQMTEIFKTKPTAQDGDFGKNVAPDLLRLHFHDCFVR
GCEGSVLMDKPGSEKTAPPNGRLEGFDAVDKIKAALEGECPGTVSCADLLAFAARDGVRLTGGFFYRVPAGRRDGYDSIAAEATKNLPDPRMNVDQLTLNFKNQGLTRDEMVILSGAHTI
GDVACHHIDNRLYTYPGNNGVVPSLPRAFVKKLKGICPRPNLFDITVDMDQVTPIRFDSQYYKNLASKTSVLSSDQVLYDDVRTRPLVRVLESKLAFLSKFGPAMVRMGNINVLTGNQGE
VRLNCRRKNSPGSA

Retrieve as FASTA  
Remarks complete sequence from genomic (introns 1 and 3) and 1 EST. Strain="Villersexel 2003" and ecotype="Gransden 2004".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAGAATTCATCGAGATGTATCCGTTCTTGGGTCGATGGCGCTAGTTGCTTTGTGCTTGTATTGTGGCGTCGCTGGCGCAGTTCTCAATTACACGCCTGGCTTACGATACGATTTC
TACAAGAACAGCTGCCCACGAGCGGACGACATAGTCTTCGAACAGATGACGGAGATTTTCAAAACAAAGCCCACCGCTCAGGATGGTGATTTCGGCAAGAATGTGGCTCCTGACCTCCTC
CGGCTTCATTTCCATGACTGTTTCGTCCGT
GTAAGTCATCAATCTCACACCGCGTGAACGAGAAAGTGTGCACCGCCACCCTTGCATTGCAAGTTTCGCCTTCCGGAATCCAGGCGCCTT
CGTTCGCATCCTGGTTTCCAACTTACTCCCTTCAGCTGTTCCCATAGCGGCGGATCTTGTGTTGTTTTACTGTGAAGCGTCAGCGTCGCACCCTCAAAAGGTTTGTTTGAATGCATGTGT
TTGACCATCGTACTGATGATGAGTGTGAAACGTGGTTCTTGAATGCCACTCCAGGGGGTTGCGAAGGTTCAGTTCTTATGGACAAGCCCGGATCGGAGAAGACCGCACCTCCCAATGGTC
GCCTGGAAGGATTCGACGCCGTGGATAAAATCAAGGCTGCGCTTGAGGGGGAATGCCCGGGGACTGTCTCCTGCGCCGACCTGCTGGCATTTGCGGCCCGGGACGGTGTGAGACTGACCG
GAGGATTTTTCTACAGGGTGCCCGCCGGACGCAGAGACGGATACGATTCCATAGCAGCCGAGGCGACGAAGAACCTGCCCGACCCACGGATGAACGTCGACCAGCTGACCCTTAACTTCA
AGAATCAGGGACTGACAAGAGATGAGATGGTCATCCTTTCAG
GTAAACGACGATGCGACAATCCCTTGACTCCTCACCACTCGCATCTTGTTGTACCTCCACATCTACGCTTGCATTCCA
ATGCTGGCAATCTCGAGAGGATGCAGCGATCAGAGTGATGTTGCCTGAGCAACTGATGCAACGAGTGGCAATCCGGCGGCATTCGTCGTGATTACAGCGAGATCAGAGTCTCATTAGAAC
GATGTCTGATGTGGACCCTTGATTGCAGGTGTGCTCACACTATTGGCGACGTCGCATGCCACCACATCGACAACAGGCTGTACACTTACCCCGGAAACAATGGGGTCGTCCCAAGCCTTC
CGAGGGCGTTCGTCAAAAAGCTGAAGGGTATCTGCCCGCGGCCGAATCTGTTCGATATCACCGTAGACATGGATCAGGTCACTCCGATCAGATTCGACTCGCAATACTACAAGAACCTAG
CGAGCAAGACGTCCGTGCTGTCGTCGGATCAGGTTCTGTACGATGATGTAAGAACTCGGCCCCTAGTGAGGGTTCTGGAGAGCAAGTTAGCATTCTTGAGCAAGTTCGGACCAGCGATGG
TGCGGATGGGCAACATCAATGTGCTAACCGGAAACCAAGGCGAGGTTCGTCTGAACTGCCGACGAAAGAACTCTCCGGGGTCAGCGTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAGAATTCATCGAGATGTATCCGTTCTTGGGTCGATGGCGCTAGTTGCTTTGTGCTTGTATTGTGGCGTCGCTGGCGCAGTTCTCAATTACACGCCTGGCTTACGATACGATTTC
TACAAGAACAGCTGCCCACGAGCGGACGACATAGTCTTCGAACAGATGACGGAGATTTTCAAAACAAAGCCCACCGCTCAGGATGGTGATTTCGGCAAGAATGTGGCTCCTGACCTCCTC
CGGCTTCATTTCCATGACTGTTTCGTCCGT
GGTTGCGAAGGTTCAGTTCTTATGGACAAGCCCGGATCGGAGAAGACCGCACCTCCCAATGGTCGCCTGGAAGGATTCGACGCCGTGGAT
AAAATCAAGGCTGCGCTTGAGGGGGAATGCCCGGGGACTGTCTCCTGCGCCGACCTGCTGGCATTTGCGGCCCGGGACGGTGTGAGACTGACCGGAGGATTTTTCTACAGGGTGCCCGCC
GGACGCAGAGACGGATACGATTCCATAGCAGCCGAGGCGACGAAGAACCTGCCCGACCCACGGATGAACGTCGACCAGCTGACCCTTAACTTCAAGAATCAGGGACTGACAAGAGATGAG
ATGGTCATCCTTTCAG
GTGCTCACACTATTGGCGACGTCGCATGCCACCACATCGACAACAGGCTGTACACTTACCCCGGAAACAATGGGGTCGTCCCAAGCCTTCCGAGGGCGTTCGTC
AAAAAGCTGAAGGGTATCTGCCCGCGGCCGAATCTGTTCGATATCACCGTAGACATGGATCAGGTCACTCCGATCAGATTCGACTCGCAATACTACAAGAACCTAGCGAGCAAGACGTCC
GTGCTGTCGTCGGATCAGGTTCTGTACGATGATGTAAGAACTCGGCCCCTAGTGAGGGTTCTGGAGAGCAAGTTAGCATTCTTGAGCAAGTTCGGACCAGCGATGGTGCGGATGGGCAAC
ATCAATGTGCTAACCGGAAACCAAGGCGAGGTTCGTCTGAACTGCCGACGAAAGAACTCTCCGGGGTCAGCGTGA

Retrieve as FASTA