Entry information : LsePrx32
Entry ID 3455
Creation 2006-09-02 (Christophe Dunand)
Last sequence changes 2006-09-02 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsePrx32
Name LsePrx32
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca serriola    [TaxId: 75943 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsePrx32
start..stop
S start..stop
LsaPrx32 698 0 1..340 1..340
LperPrx32 657 0 6..340 17..351
HaPrx15 632 0 1..345 1..346
LsPrx32 593 0 1..289 1..289
Literature and cross-references LsePrx32
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project Unpublished (2002)
EST ref. GenBank:   DW116299 [5' end]   BU008629 [3' end]
Protein sequence: LsePrx32
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   351 (324)
PWM (Da):   %s   38396.45 (35546.0) Transmb domain:   %s   i7-24o
PI (pH):   %s   7.05 (7.21) Peptide Signal:   %s   cut: 28 range:28-351
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAASSTSLFL VFSSLLIFSS LLYVSDADYS APIMKGLSWD YHHKTCHKLE KIVRKHLKKV FKEDVGQAAG LLRLHFHDCF VQGCDGSVLL DGSHGGPSEQ TAPPNQSLRK QAFIIIEDLR  NLIHKECGRV VSCADIAALA ARDAVHLSGG PDYDVPLGRK DGLTFATQNA TLANLPAPTS NATTIVSALA TKNLNPTDVV ALSGGHTIGV SHCSSFTPRL YPTQDPTMEK TFAHGLKEVC 
PTNTTDATTV MDIYSPIKFD NKYYVDLINR QGLFTSDQDL YTHKETKPIV ESFAHDEEVF FEKFVLAMIK MGQLEVLTGG KGEIRAHCSI RNPDNKGYFS DFVRRGGPIR S 

Retrieve as FASTA  
Remarks Complete sequence from 5 ESTs: DW116299, DW112690, DW120298 and BU008629 (3'end), BU008629 (3'). Frame shift in the clone 3'.