1. Browse the Database
  2. View Redoxidase
Entry information : LsaAPx04
Entry ID 3460
Creation 2007-11-14 (Christophe Dunand)
Last sequence changes 2007-11-14 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2007-11-14 (Christophe Dunand)
Peroxidase information: LsaAPx04
Name LsaAPx04
Class Ascorbate peroxidase     [Orthogroup: APx004]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaAPx04
start..stop		 S start..stop
HaAPx05 491 4.4e-177 1..292 1..286
VvAPx07 422 1.19e-149 4..292 3..286
CpapAPx06 417 1.18e-147 4..292 6..289
PpeAPx05 414 1.73e-146 4..292 3..291
Literature and cross-references LsaAPx04
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   BQ864026 [5' end]  DW136771 [Fragment]
Cluster/Prediction ref. UniGene:   Lsa.9146
Protein sequence: LsaAPx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   292
PWM (Da):   %s   31090.7  
PI (pH):   %s   7.84
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGLISFLSTV PTLLPIAPLP SYSSSRCPIH SGTISCKIDD AGSHEINGVR RRDVLNCFGA AISMELVASC SPISSPFIET ANAADLIQRR QRSDFQSSIK MTLYKAIKAN PELISPLLTL  ALNDSMTYDK PTKTGGPNGS IRFSSEIERP ENKGLSAALS MVEEAKKEID SYSKGGPISY SDLIQLAAQS AVKSTFLASA IRKCGGNEEK GNLLYSAYGS NGQWGIFDRN FGRSDAQEPD 
PEGRVPNWAT ASVSxMKDKF IAIGLGPRQL AVMSAFLGPD QFSTEAKLAT DP 

Retrieve as FASTA  
Remarks Partial sequence from 9 ESTs. 3'end is missing.