1. Browse the Database
  2. View Redoxidase
Entry information : LsaPrx27
Entry ID 3465
Creation 2006-08-13 (Christophe Dunand)
Last sequence changes 2006-08-13 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsaPrx27
Name LsaPrx27
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx27
start..stop		 S start..stop
LsPrx27 590 0 1..285 1..285
LvPrx27 536 0 1..262 1..262
LperPrx27 523 0 1..275 1..275
LsPrx28 499 0 1..283 1..285
Literature and cross-references LsaPrx27
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and McHale,L. Lettuce (Lactuca sativa) ESTs (set 3) from the Compositae Genome
EST ref. GenBank:   DY982238 [5' end]
Protein sequence: LsaPrx27
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   287 (266)
PWM (Da):   %s   31595.79 (29312.5)  
PI (pH):   %s   8.27 (8.26) Peptide Signal:   %s   cut: 22 range:22-287
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MADRVISILL LISFLISSSH SQQLTTSYYQ KTCPKFDQIM QDTTTNKQIN SPTTAAAALR LFFHDCLVEG CDASVLISSR PFSKAERDAD INLSLPGDGF DVVVRAKTAL ELACPGVVSC  ADILAVATRN LVTMMGGPFY TVKLGRRDGL VSRASRVEGN LPRPTMSMNQ LISIFSSRGF SIQEMVALTG AHTIGFSHCK EFSSEIYNYS RTSQYDPSFN PRYAEGLRSA CADYHRNPSL 
SVFNDVMTPR NFDNAYYQNL PKGLGVLKSD RALVMDPRTK PYVELCA 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Short 3'end is missing.