The peroxidases and oxidases database
Entry information : LsaPrx42
Entry ID 3480
Creation 2006-08-14 (Christophe Dunand)
Last sequence changes 2006-08-14 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-04-25 (Christophe Dunand)
Peroxidase information: LsaPrx42
Name LsaPrx42
Class Class III peroxidase     [Orthogroup: Prx024]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx42
start..stop		 S start..stop
HaPrx42 474 1.2e-170 1..287 1..287
HaPrx24 458 2.46e-164 1..287 1..286
HaPrx102 426 7.53e-152 1..287 3..286
LperPrx41 424 1.08e-151 1..279 3..284
Literature and cross-references LsaPrx42
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and McHale,L. Lettuce (Lactuca sativa) ESTs (set 3) from the Compositae Genome
EST ref. GenBank:   DW126158 [5' end]
Protein sequence: LsaPrx42
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   286 (305)
PWM (Da):   %s   30630.59 (33177.8) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.2 (6.88) Peptide Signal:   %s   cut: 27 range:27-331
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVNNKTVAFV VAIGFIFLNL SGHCYGALQF GFYNGKCRGS DVEDIVRKTV LSKFLVDRTI TPALLRMQFH DCFVNGCDAS ILLDGTNSEK TAPPNLSVRG YDVIDAVKTA VERVCPDVVS  CADIIVMATR DAVSLSGGGR YNVQTGRRDG RVSLAKDAQI LPSPSSSVSS AIQAFATKGL TATDMIYLLG GHTIGIAHCS FFQDRLYNFE NSGKPDPTMD LALLTSLRRT CPRNATVDGK 
ANLDQNSFSS AVVDKSFYTQ INVRRGVLQI *SELAVDGLS KSTVAAI 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs (DW126158 and DY983684). Stop codon in the first accession and frame shift in the second. 3'end is missing. Cultivar="Salinas".