Entry information : LsaPrx44
Entry ID 3482
Creation 2006-08-14 (Christophe Dunand)
Last sequence changes 2006-08-14 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2010-04-30 (Christophe Dunand)
Peroxidase information: LsaPrx44
Name LsaPrx44
Class Class III peroxidase     [Orthogroup: Prx036]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx44
start..stop
S start..stop
HaPrx107 517 0 1..295 1..290
ZePrx01 501 0 3..295 6..293
CroPrx34 461 1.86e-165 2..295 1..294
MePrx90 460 6.59e-165 3..295 8..300
Literature and cross-references LsaPrx44
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and McHale,L. Lettuce (Lactuca sativa) ESTs (set 3) from the Compositae Genome
EST ref. GenBank:   DY983137.1 [5' end]
Protein sequence: LsaPrx44
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   295 (274)
PWM (Da):   %s   32453.35 (30175.1)  
PI (pH):   %s   8.47 (8.65) Peptide Signal:   %s   cut: 22 range:22-295
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MIMSTIVAYI LILSVVPFSE AVLSAHYYDQ TCPQAENIIY QTVRNASIYD PKVPARLLRM FFHDCFIRGC DASLLLDSTT GNKAEKDGPP NISVRSFYVI DDAKTKLGKA CPHTVSCADV  IAIAARDVVA MSQGPWWNVL KGRKDGRVSL ANETINLPSP FSNTSTLIKS FAKRGLGVKD LVALSGGHTL GFSHCSSFSA RLHNFSTENF SDPSINSEFA MNLKKKCPIH NKDHNAGEFL 
DSTSSTFDND YYKRITMGKG VFGSDQALYG DRRNKIIVDS FAKDRNLFLS EFAIS 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 3'end is missing, and frame shift. Cultivar="Salinas".
cDNA
Send to BLAST