Entry information : LsaPrx28
Entry ID 3484
Creation 2006-08-28 (Christophe Dunand)
Last sequence changes 2006-08-28 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsaPrx28
Name LsaPrx28
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx28
start..stop
S start..stop
LsPrx28 583 0 1..285 1..285
LperPrx28 574 0 3..284 1..282
HaPrx16 515 0 3..285 6..289
LsPrx27 496 5e-180 1..285 1..283
Literature and cross-references LsaPrx28
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and McHale,L. Lettuce (Lactuca sativa) ESTs (set 3) from the Compositae Genome
EST ref. GenBank:   DY984281 [5' end]
Protein sequence: LsaPrx28
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   285 (262)
PWM (Da):   %s   31252.76 (28786.4)  
PI (pH):   %s   9.07 (9.03) Peptide Signal:   %s   cut: 24 range:24-285
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAIRVNPLSL ILCISLFIAS SHSQQLTTTF YQKSCPRFEQ IMQDTTTNKQ IASPTTAGAA LRLFFHDCLV EGCDASVLIS STPFNKAERD ADINLSLPGD GFDVVVRAKT ALELSCPGVV  SCADILAVAT RNLVTMMGGP FYNVKLGRRD GVVSRASRAE LILPKSTMSM NRIIKIFTSR GFSIQEMVAL TGAHTIGFSH CSEFSSDIYN YSRTAQSDPS YNPRYAAGLR NACADYKKNP 
SLSVFNDIMT PRDFDNSYYK KLPRGLGVLR SDRALTMDAR TRPFV 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs (DY984281 and DY977526). 3'end is missing. Cultivar="Salinas".