Entry information : LsaPrx47
Entry ID 3485
Creation 2006-08-14 (Christophe Dunand)
Last sequence changes 2006-08-14 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsaPrx47
Name LsaPrx47
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation Apoplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx47
start..stop
S start..stop
LsaPrx10 505 0 1..273 6..278
LperPrx10 492 2.54e-178 1..273 6..278
LvPrx10 490 4.44e-178 1..267 6..272
LsPrx10 436 2.16e-157 1..238 6..243
Literature and cross-references LsaPrx47
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and McHale,L. Lettuce (Lactuca sativa) ESTs (set 3) from the Compositae Genome
EST ref. GenBank:   DY982550 [Fragment]
Protein sequence: LsaPrx47
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   271 (254)
PWM (Da):   %s   28908.34 (27066.2)  
PI (pH):   %s   6.14 (5.93) Peptide Signal:   %s   cut: 18 range:18-271
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ISILILVLLQ SILHSQAQLY IGFYSGTCSA AEFIVKEEVA KAYSQDRGLV AGLVRLHFHD CFVKGCDASV LIDSTPSNKA EKDSPSNNPS LHGINVIDDA KARLESLCPR LVSCADIIAF  AARDSFDITG GPGYDVPAGK TDGRVSLKSD TKALPPATAN LNQLTQMFST HGLTQEEMVT LSGAHTIGRS HCTSVASRLY TYTPSGNQDP GLNTLYASKL EQECPKGNSN AN*AVPMNPN 
SPTISDT*YY VDVMNKKCLF TSDQSLLASM NTA 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Wrongly included in the unigene Lsa.440 (LsaPrx10). PS and 3'end are missing.