Entry information : LsaPrx47
Entry ID 3485
Creation 2006-08-14 (Christophe Dunand)
Last sequence changes 2006-08-14 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsaPrx47
Name LsaPrx47
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation Apoplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx47
start..stop
S start..stop
LsaPrx10 505 0 1..273 6..278
LperPrx10 492 2e-178 1..273 6..278
LvPrx10 490 4e-178 1..267 6..272
LsPrx10 436 2e-157 1..238 6..243
Literature and cross-references LsaPrx47
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and McHale,L. Lettuce (Lactuca sativa) ESTs (set 3) from the Compositae Genome
EST ref. GenBank:   DY982550 [Fragment]
Protein sequence: LsaPrx47
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   271 (254)
PWM (Da):   %s   28908.34 (27066.2)  
PI (pH):   %s   6.14 (5.93) Peptide Signal:   %s   cut: 18 range:18-271
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ISILILVLLQ SILHSQAQLY IGFYSGTCSA AEFIVKEEVA KAYSQDRGLV AGLVRLHFHD CFVKGCDASV LIDSTPSNKA EKDSPSNNPS LHGINVIDDA KARLESLCPR LVSCADIIAF  AARDSFDITG GPGYDVPAGK TDGRVSLKSD TKALPPATAN LNQLTQMFST HGLTQEEMVT LSGAHTIGRS HCTSVASRLY TYTPSGNQDP GLNTLYASKL EQECPKGNSN AN*AVPMNPN 
SPTISDT*YY VDVMNKKCLF TSDQSLLASM NTA 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Wrongly included in the unigene Lsa.440 (LsaPrx10). PS and 3'end are missing.