The peroxidases and oxidases database
Entry information : MtPrx23 (Medtr7g093370.1[4.0] / Medtr7g093370.1[3.5] / Medtr7g112100.1[3.0])
Entry ID 349
Creation 2005-09-13 (Christophe Dunand)
Last sequence changes 2013-12-12 (Christophe Dunand)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-07-29 (Messaoudi)
Peroxidase information: MtPrx23 (Medtr7g093370.1[4.0] / Medtr7g093370.1[3.5] / Medtr7g112100.1[3.0])
Name (synonym) MtPrx23 (Medtr7g093370.1[4.0] / Medtr7g093370.1[3.5] / Medtr7g112100.1[3.0])
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue type Pods
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx23
start..stop		 S start..stop
GmPrx136 580 0 46..373 4..330
GmPrx310 563 0 51..373 6..331
GmPrx38 545 0 45..373 1..331
GmPrx71 542 0 45..373 1..331
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 37110748..37111089 342 N° 2 37111172..37111366 195 N° 3 37111491..37111656 166 N° 4 37111891..37112309 419
join(37110748..37111089,37111172..37111366,37111491..37111656,37111891..37112309 )


exon

Literature and cross-references MtPrx23 (Medtr7g093370.1[4.0] / Medtr7g093370.1[3.5] / Medtr7g112100.1[3.0])
Literature Harrison,M.J. et al., unpublished
DNA ref. Phytozome 12:   chr7 (37110748..37112309)
Cluster/Prediction ref. Phytozome Gene 12:   31077007
Omic ref. Gene atlas:   Mtr.12601.1.S1_at Legoo:   Mtr.12601.1.S1_at
Protein sequence: MtPrx23 (Medtr7g093370.1[4.0] / Medtr7g093370.1[3.5] / Medtr7g112100.1[3.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   373 (296)
PWM (Da):   %s   40345.16 (31804.7)  
PI (pH):   %s   8.2 (7.38) Peptide Signal:   %s   cut: 30 range:30-325
Sequence 414
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNYPMKTLTSSIIEDRHSSIYIPYQLLRYFIKKSNSKEETKKPTMFSPKFYSIFTVLIFLLLNPSHAQLTSTFYSNTCPSVSSIVRNVVQQALQNDPRITASLTRLHFHDCFVNGCDASLLLDQGGNITLSEKNAVPNNNSARGFDVVDKIKTSVENSCPSVVSCADILALAAEASVSLSGGPSWNVLLGRRDGLIANQSGANTSIPNPTESLANVTAKFAAVGLNTSDLVALSGAHTFGRGQCRFFNQRLFNFSGTGKPDPTLNSTYLATLQQNCPQNGSGNTLNNLDPSSPNNFDNNYFKNLLKNQGLLQTDQELFSTNGAATISIVNNFASNQTAFFEAFVQSMINMGNISPLIGSQGEIRSDCKKVNGS

Retrieve as FASTA  
Remarks Complete sequence from 17 ESTs and genomic sequence (chromo 7, 3 introns). Very long PS.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGAATTACCCAATGAAAACTTTAACTTCAAGCATAATTGAAGACAGACATTCTTCAATATATATACCTTATCAACTCCTCAGATATTTCATCAAGAAATCAAACTCCAAAGAAGAAACTA
AGAAGCCAACCATGTTTTCTCCTAAATTTTATTCCATTTTCACAGTGCTAATATTCCTCCTTCTTAATCCATCACATGCTCAATTGACCTCAACATTCTACTCCAACACATGCCCCAGTG
TTTCTTCTATAGTAAGAAATGTTGTTCAACAAGCTCTGCAAAATGATCCTCGTATTACCGCGAGCCTAACCCGTCTTCACTTTCACGATTGCTTTGTTAATGTAATTTCTTATACATTTT
GATTAATGAGCCAGAATTTAGGTGATTGATTAATAACTAATGTCCTTAATTTGTGTATTGCAGGGATGTGATGCATCTCTTTTATTAGATCAAGGTGGAAACATAACACTAAGTGAGAAA
AATGCTGTTCCTAACAATAATTCAGCTCGTGGCTTTGATGTAGTTGACAAAATCAAAACCTCTGTTGAAAATTCATGTCCTTCTGTCGTGTCTTGTGCTGATATTTTGGCTCTTGCTGCT
GAAGCTTCTGTATCTTTGGTACCTAATTCATATCTAGTTAATTATTTATCATTACTAATTTTATCCTCAAGTCTACGAGTCGAGTTTAAAGACTTTTTTTCGAGTCTATGTAGACTCGCG
AGTCTAACAATCTTGTTTGCAGTCAGGAGGTCCTTCATGGAATGTACTACTTGGCAGAAGGGATGGTCTGATTGCAAACCAATCTGGTGCCAACACATCCATTCCTAATCCAACTGAAAG
CTTAGCCAATGTCACTGCCAAATTTGCTGCTGTTGGCTTAAACACAAGTGATCTAGTTGCATTATCTGGTAATCACACTTACTTCTCTAATCTAGACTTTAATTAGAGTATGTTGGATTA
GGACATATAAATTTCAACAATTGTATCTAATGGTGGAAATTTGACCGTACGACAGGATGTTTGAAGGGATTCATAGCAAAGAAGTTTTGTAGAAAATTATTGATTTTTTCATTATGTGTA
TGATAATTAATAAGCATTTTTTTTTAACTATTGGTTGACTCAAATGGATCAACTTGAATTAGGTGCACATACTTTTGGTCGTGGACAATGTAGATTTTTCAACCAAAGACTATTCAACTT
CAGTGGCACAGGCAAGCCTGATCCAACACTAAATTCAACATATCTAGCAACTCTACAACAAAATTGTCCACAAAATGGAAGTGGTAACACACTAAACAATCTTGACCCTTCATCACCAAA
CAATTTCGACAACAACTACTTCAAAAATCTTCTCAAAAATCAAGGTCTTCTTCAAACGGACCAAGAATTGTTTTCCACTAATGGTGCTGCTACAATCTCCATTGTTAACAACTTTGCAAG
CAACCAAACAGCTTTTTTTGAAGCCTTTGTTCAGTCCATGATTAACATGGGTAATATTAGTCCATTAATTGGAAGTCAAGGAGAAATTAGATCCGATTGTAAGAAAGTTAATGGAAGTTG
A

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGAATTACCCAATGAAAACTTTAACTTCAAGCATAATTGAAGACAGACATTCTTCAATATATATACCTTATCAACTCCTCAGATATTTCATCAAGAAATCAAACTCCAAAGAAGAAACTA
AGAAGCCAACCATGTTTTCTCCTAAATTTTATTCCATTTTCACAGTGCTAATATTCCTCCTTCTTAATCCATCACATGCTCAATTGACCTCAACATTCTACTCCAACACATGCCCCAGTG
TTTCTTCTATAGTAAGAAATGTTGTTCAACAAGCTCTGCAAAATGATCCTCGTATTACCGCGAGCCTAACCCGTCTTCACTTTCACGATTGCTTTGTTAATGGATGTGATGCATCTCTTT
TATTAGATCAAGGTGGAAACATAACACTAAGTGAGAAAAATGCTGTTCCTAACAATAATTCAGCTCGTGGCTTTGATGTAGTTGACAAAATCAAAACCTCTGTTGAAAATTCATGTCCTT
CTGTCGTGTCTTGTGCTGATATTTTGGCTCTTGCTGCTGAAGCTTCTGTATCTTTGTCAGGAGGTCCTTCATGGAATGTACTACTTGGCAGAAGGGATGGTCTGATTGCAAACCAATCTG
GTGCCAACACATCCATTCCTAATCCAACTGAAAGCTTAGCCAATGTCACTGCCAAATTTGCTGCTGTTGGCTTAAACACAAGTGATCTAGTTGCATTATCTGGTGCACATACTTTTGGTC
GTGGACAATGTAGATTTTTCAACCAAAGACTATTCAACTTCAGTGGCACAGGCAAGCCTGATCCAACACTAAATTCAACATATCTAGCAACTCTACAACAAAATTGTCCACAAAATGGAA
GTGGTAACACACTAAACAATCTTGACCCTTCATCACCAAACAATTTCGACAACAACTACTTCAAAAATCTTCTCAAAAATCAAGGTCTTCTTCAAACGGACCAAGAATTGTTTTCCACTA
ATGGTGCTGCTACAATCTCCATTGTTAACAACTTTGCAAGCAACCAAACAGCTTTTTTTGAAGCCTTTGTTCAGTCCATGATTAACATGGGTAATATTAGTCCATTAATTGGAAGTCAAG
GAGAAATTAGATCCGATTGTAAGAAAGTTAATGGAAGTTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATTACC CAATGAAAAC TTTAACTTCA AGCATAATTG AAGACAGACA TTCTTCAATA TATATACCTT ATCAACTCCT CAGATATTTC ATCAAGAAAT CAAACTCCAA AGAAGAAACT  AAGAAGCCAA CCATGTTTTC TCCTAAATTT TATTCCATTT TCACAGTGCT AATATTCCTC CTTCTTAATC CATCACATGC TCAATTGACC TCAACATTCT ACTCCAACAC ATGCCCCAGT  GTTTCTTCTA TAGTAAGAAA TGTTGTTCAA CAAGCTCTGC AAAATGATCC TCGTATTACC GCGAGCCTAA CCCGTCTTCA CTTTCACGAT TGCTTTGTTA ATGGATGTGA TGCATCTCTT  TTATTAGATC AAGGTGGAAA CATAACACTA AGTGAGAAAA ATGCTGTTCC TAACAATAAT TCAGCTCGTG GCTTTGATGT AGTTGACAAA ATCAAAACCT CTGTTGAAAA TTCATGTCCT  TCTGTCGTGT CTTGTGCTGA TATTTTGGCT CTTGCTGCTG AAGCTTCTGT ATCTTTGTCA GGAGGTCCTT CATGGAATGT ACTACTTGGC AGAAGGGATG GTCTGATTGC AAACCAATCT  GGTGCCAACA CATCCATTCC TAATCCAACT GAAAGCTTAG CCAATGTCAC TGCCAAATTT GCTGCTGTTG GCTTAAACAC AAGTGATCTA GTTGCATTAT CTGGTGCACA TACTTTTGGT  CGTGGACAAT GTAGATTTTT CAACCAAAGA CTATTCAACT TCAGTGGCAC AGGCAAGCCT GATCCAACAC TAAATTCAAC ATATCTAGCA ACTCTACAAC AAAATTGTCC ACAAAATGGA  AGTGGTAACA CACTAAACAA TCTTGACCCT TCATCACCAA ACAATTTCGA CAACAACTAC TTCAAAAATC TTCTCAAAAA TCAAGGTCTT CTTCAAACGG ACCAAGAATT GTTTTCCACT  AATGGTGCTG CTACAATCTC CATTGTTAAC AACTTTGCAA GCAACCAAAC AGCTTTTTTT GAAGCCTTTG TTCAGTCCAT GATTAACATG GGTAATATTA GTCCATTAAT TGGAAGTCAA  GGAGAAATTA GATCCGATTG TAAGAAAGTT AATGGAAGTT GAAATGGGGA GGATCGTCAT GCATGCATGA TAGTATATGT ACAAGATATT CTTACTCCAA CTTATATGCT CAAACTTTAA  GACCTTATTT GTGTGATCTG ATTTAATAAA ATAAGGTAAA ATTGCTTTAT CATTTTTTTT TTTTGGGTTG ATAAAATTGT TTTTTGTTTT TGTTTTGAGA GGATTGATAA AATTGTTTAT 
CAATATTAAA TAAAATAATG TTTGTGTTGG CCG 

Retrieve as FASTA