Entry information : MtPrx25 (Medtr8g076820.1[4.0] / Medtr8g076820.1[3.5] / Medtr8g092750.1[3.0])
Entry ID 351
Creation 2006-06-21 (Christophe Dunand)
Last sequence changes 2010-09-16 (Haythem Mhadhbi)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-07-29 (Messaoudi)
Peroxidase information: MtPrx25 (Medtr8g076820.1[4.0] / Medtr8g076820.1[3.5] / Medtr8g092750.1[3.0])
Name (synonym) MtPrx25 (Medtr8g076820.1[4.0] / Medtr8g076820.1[3.5] / Medtr8g092750.1[3.0])
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue types Arbuscular mycorrhiza (inoculated root)
Roots
Roots nodules
Seedling roots
Inducers Glomus intraradices infection
Glomus versiforme infection
Nitric Oxide (NO)
Nodulation
Sinorhizobium inoculation
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx25
start..stop
S start..stop
NnPrx50 584 0 1..332 1..332
GmPrx33 572 0 1..330 1..330
RcPrx17 569 0 1..330 1..330
MePrx01 567 0 1..331 1..331
Gene structure Fichier Exons


exon

Literature and cross-references MtPrx25 (Medtr8g076820.1[4.0] / Medtr8g076820.1[3.5] / Medtr8g092750.1[3.0])
Literature REFERENCE 1 Journet,E.P. et al., unpublished, Harrison,M.J. et al., unpublished.
REERENCE 2 Ferrarini A, De Stefano M, Baudouin E, Pucciariello C, Polverari A, Puppo A, Delledonne M.Expression of Medicago truncatula genes responsive to nitric oxide in pathogenic and symbiotic conditions. MPMI. 2008 Jun;21(6):781-90.
Protein ref. UniProtKB:   Q1T1B3
DNA ref. Phytozome 12:   chr8 (32581901..32580330)
Cluster/Prediction ref. Phytozome Gene 12:   31074744 UniGene:   Mtr.7592
Omic ref. Gene atlas:   Mtr.15484.1.S1_at Legoo:   Mtr.15484.1.S1_at
Protein sequence: MtPrx25 (Medtr8g076820.1[4.0] / Medtr8g076820.1[3.5] / Medtr8g092750.1[3.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (310)
PWM (Da):   %s   36653.55 (34267.4) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.39 (8.54) Peptide Signal:   %s   cut: 23 range:23-332
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MANSLSFLMLLSLLAFAPFCLCHKKMGSYLYPQFYDYSCPQAQNI
VKSILANAVAKEPRIAASLLRLHFHDCFVK
GCDASILLDNSGSIISEKGSNPNRNSARGFEVIDEIKYALEKECPHTVSCADILAIAARDSTVLAGGPNWEVPLGRRDSLGASLSGSNNNIPAPNNTFQTILTKFKLQGLDIVDLVALSG
SHTIGKSRCTSFRQRLYNQTGNGKQDFTLDQYYAAELRTQCPRSGGDQNLFFLDYVTPTKFDNNYFKNLLAYKGLLSSDEILLTKNQESAELVKLYAERNDLFFEQFAKSMIKMGNISPL
TGSRGNIRTNCRVINTW

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 8, 3 introns) and 10 ESTs.
DNA
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CDS
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cDNA
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