Entry information : LsPrx12-1
Entry ID 3531
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsPrx12-1
Name LsPrx12-1
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca saligna    [TaxId: 75948 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsPrx12-1
start..stop
S start..stop
LsaPrx12 555 0 1..277 1..277
LsPrx12-3 487 6e-177 1..276 1..275
LsePrx13 488 8e-177 1..277 1..276
LsPrx12-2 483 3e-175 1..272 1..272
Literature and cross-references LsPrx12-1
Literature Kozik,A et al., Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   DW046262 [5' end]
Protein sequence: LsPrx12-1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   276 (250)
PWM (Da):   %s   29570 (26695.5) Transmb domain:   %s   i12-34o
PI (pH):   %s   6.74 (6.50) Peptide Signal:   %s   cut: 27 range:27-276
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MECFTHNKTP LFFLVLLATL TNVALGQGTR VGFYRTSCPR VEAIVQSAVD AANRANPGVP PGLVRMFFHD CFVNGCDASI LITGPGSERT APPNSLLRGF EIIDAAKTEL ERVCPGVVSC  ADILAIAARD SVLLAGGIAR WPVPLGRRDG LVSRAADTAN LPAFNDAVNV QIRKFSEKGL NTQDLVTLSG AHTIGTAACA LFSYRLYNFN NTNGPDPSID QTFLPTLRNL CPNGGDGTRR 
VALDTGSENR FDNSYFSNLR DRRGVLESDQ LL*SDPT 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Frame shift before FHDC and after FDN, 3'end is missing. Strain="PI-491204".