Entry information : LsPrx13-2
Entry ID 3535
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsPrx13-2
Name LsPrx13-2
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca saligna    [TaxId: 75948 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsPrx13-2
start..stop
S start..stop
LsaPrx13 556 0 1..283 1..282
LsPrx13-1 540 0 1..275 1..275
LsePrx13 504 0 1..283 1..283
LvPrx13 502 0 1..260 1..260
Literature and cross-references LsPrx13-2
Literature Kozik,A et al., Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   DW065870 [5' end]
Protein sequence: LsPrx13-2
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   283 (257)
PWM (Da):   %s   30436.5 (27546.9) Transmb domain:   %s   o10-32i
PI (pH):   %s   7.73 (7.71) Peptide Signal:   %s   cut: 27 range:27-283
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEVFSHNKTP LFFLVLFASL ITLALGQTRV GFYQTSCPRV EAIVQSAVAA ANRANPGVPP GLVRMFFHDC FVNGCDASIL INGDGSERTA PPNTLLRGYE IIDAAKTELE RVCPGVVSCA  DILAIAARDS VLLAGGIARW QVPTGRRDGL VSRAADTTNL PAFNDPVNVQ IRKFAEKGLN TQDLVTLSGA HTLGTGACLV FSYRLYNFNN TNSPDPSIDP AFLATLRNLC PNGGDSRRRV 
ALDTGSENRF DTSYFANLRS GRGVLESDQV LWGNPYTRTL AQR 

Retrieve as FASTA  
Remarks Partial sequence from DW065870. 3'end is missing. Very similar to LsPrx13-a (sequencing error?). 5'UTR (LSILHYPKYIFLV)