Entry information : LsPrx13-1
Entry ID 3536
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsPrx13-1
Name LsPrx13-1
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca saligna    [TaxId: 75948 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsPrx13-1
start..stop
S start..stop
LsaPrx13 555 0 1..275 1..275
LsPrx13-2 540 0 1..275 1..275
LvPrx13 503 0 1..260 1..260
LperPrx13 499 0 1..275 1..276
Literature and cross-references LsPrx13-1
Literature Kozik A et al., Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   DW055491 [5' end]
Protein sequence: LsPrx13-1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   275 (249)
PWM (Da):   %s   29448.98 (26559.4) Transmb domain:   %s   o10-32i
PI (pH):   %s   6.26 (5.82) Peptide Signal:   %s   cut: 27 range:27-275
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEVFSHNKTP LFFLVLFASL ITLALGQTRV GFYQTSCPRV EAIVQSAVAA ANRANPGVPP GLVRMFFHDC FVNGCDASIL INGDGSERTA PPNTLLRGYE IIDAAKTQLE TECPGVVSCA  DILAIAARDS VLLAGGIARW QVPLGRRDGL VSRAADTTNL PAFNDAVDVQ IRKFAEKGLN TQDLVTLSGA HTLGTGACLV FSYRLYNFNN TNGPDPSIDP AFLATLRNLC PNGGDSRRRV 
ALDTGSENRI DTSYFCNLRS GRGVLESDQV LWGKP 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 3'end is missing. 5'UTR (YQIIQYFN--KT-IFLV)