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Entry information : LsPrx12-2
Entry ID 3537
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsPrx12-2
Name LsPrx12-2
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca saligna    [TaxId: 75948 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsPrx12-2
start..stop		 S start..stop
LsaPrx12 501 0 1..274 1..274
LsPrx12-1 498 0 1..272 1..272
LsaPrx13 483 2e-174 1..273 1..272
LsPrx13-2 479 7.38e-174 1..273 1..272
Literature and cross-references LsPrx12-2
Literature Kozik,A. et al.,Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   DW059314 [5' end]
Protein sequence: LsPrx12-2
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   274 (248)
PWM (Da):   %s   29192.78 (26329.2) Transmb domain:   %s   o370-392i511-533o553-575i732-749o
PI (pH):   %s   6.49 (6.50) Peptide Signal:   %s   cut: 27 range:27-274
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEVFCNNKIP LFFLVLLATL TSLAQGQGTR NGFYQTSCPR VEAIVQSAVA AADRANAGVP PGLVRMFFHD CFVNGCDASI LLNGPSSERT APPNSLLRGY EIIDAAKTEL ERVCPGVVSC  ADILALAARD SVLLAGGIAR WAVPLGRRDG LVSRAADTAN LPAFNDAVDV QIRKFAEKGL NAQDLVTLSG AHTIGTAACA LFSYRLYNFN NTNGPDPSIN QAFLPTLRNL CPNGGDGSRR 
VALDTGSQNR FDNSYYANLR DGRGVLESDQ VLWS 

Retrieve as FASTA  
Remarks Partial sequence from 3 ESTs: DW059314, DW045190, DW062652, DW052915 (frame shift). 3'end is missing. Strain="PI-491204". 5' UTR (YITNYTNLCSELA)