Entry information : LcPrx06
Entry ID 3546
Creation 2006-08-18 (Christophe Dunand)
Last sequence changes 2012-06-29 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-06-29 (Christophe Dunand)
Peroxidase information: LcPrx06
Name LcPrx06
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Sapindaceae Litchi
Organism Litchi chinensis    [TaxId: 151069 ]
Cellular localisation N/D
Tissue type Pericarps
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LcPrx06
start..stop
S start..stop
CpapPrx05 223 3e-74 1..134 69..202
LcPrx02 223 5e-74 1..134 67..200
HbPrx01 220 5e-73 1..134 67..200
CclPrx05 216 2e-71 1..134 66..199
Literature and cross-references LcPrx06
Literature Lin L., Guo Z., Pan D. Cloning and characterization of peroxidase gene in Litchi chinensis Sonn. pericarp.
Protein ref. UniProtKB:   Q206Y7 [Fragment]
mRNA ref. GenBank:   DQ408430.1 [Fragment]
Protein sequence: LcPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   134
PWM (Da):   %s   13885.89  
PI (pH):   %s   4.38
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
HFHDCFVNGC DASILLDNSA TIQSEKEALA NNNSARGFDV VDSMKAAVES ACPGVVSCAD ILTIAAEQSV NLSGGPSWTV LLGRRDSLTA NRTLANLNIP APTDPLQTLQ SKFVNVGLNN 
DTDLVALSGA HTIG 

Retrieve as FASTA  
Remarks Partial sequence from 1 mRNA. 5' and 3' ends are missing.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CATTTCCATG ATTGTTTCGT TAATGGTTGT GATGCATCGA TTTTGCTGGA CAACAGTGCT ACAATACAGA GTGAAAAAGA AGCACTTGCA AATAACAACT CAGCCAGGGG CTTCGATGTT  GTTGATAGTA TGAAAGCTGC AGTGGAAAGT GCCTGTCCAG GCGTTGTTTC CTGTGCTGAT ATTCTCACTA TAGCAGCTGA ACAATCCGTT AACTTGTCAG GAGGCCCGTC GTGGACGGTT  CTACTGGGAA GAAGAGACAG CTTGACAGCA AACAGAACTC TTGCCAATCT CAACATTCCA GCACCCACTG ATCCCCTTCA AACACTCCAA TCCAAGTTTG TCAATGTTGG CCTCAACAAT 
GATACTGATC TTGTTGCTCT CTCAGGCGCC CACACCATCG G 

Retrieve as FASTA