View Redoxidase 3579

Entry information : MtPrx[P]69 ( Medtr1g098320.1 [4.0] / Medtr1g098320.1 [3.5] / Medtr1g124800.1 [3.0])

Entry ID	3579
Creation	2006-12-22 (Christophe Dunand)
Last sequence changes	2014-07-30 (Christophe Dunand)
Sequence status	theoretical translation / pseudogene
Reviewer	Catherine Mathe
Last annotation changes	2016-04-12 (Catherine Mathe)

Peroxidase information: MtPrx[P]69 ( Medtr1g098320.1 [4.0] / Medtr1g098320.1 [3.5] / Medtr1g124800.1 [3.0])

Name (synonym)

MtPrx[P]69 ( Medtr1g098320.1 [4.0] / Medtr1g098320.1 [3.5] / Medtr1g124800.1 [3.0])

Class

Class III peroxidase [Orthogroup: N/D] N/D

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Medicago

Organism

Medicago truncatula (barrel medic) [TaxId: 3880 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MtPrx[P]69 start..stop	S start..stop
VaPrx01	166	5.74e-51	74..184	244..357
VaPrx01	101	3.85e-26	2..102	3..112
GmPrx314	164	3.16e-50	72..183	241..351
GmPrx314	110	1.69e-29	1..87	1..95
CaraPrx01	157	2.92e-49	74..179	105..208
GmPrx20	161	3.71e-49	72..183	241..351
GmPrx20	114	4.79e-31	1..87	1..95

Literature and cross-references MtPrx[P]69 ( Medtr1g098320.1 [4.0] / Medtr1g098320.1 [3.5] / Medtr1g124800.1 [3.0])

Literature	Lin S., Dixon R., May G., Sumner L., Gonzales B., Cook D., Kim D., Roe B.A.; Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
DNA ref.	Phytozome 12: chr1 (44266112..44265285)
Cluster/Prediction ref.	Phytozome Gene 12: 31092733
Omic ref.	Gene atlas: Mtr.49528.1.S1_at Legoo: Mtr.49528.1.S1_at

Protein sequence: MtPrx[P]69 ( Medtr1g098320.1 [4.0] / Medtr1g098320.1 [3.5] / Medtr1g124800.1 [3.0])

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	184 (154)
PWM (Da):	20428.29 (17046.6)
PI (pH):	8.98 (8.93)	Peptide Signal:	cut: 33 range:31-184

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAYASCRSAF FTFLLILTFL SFSHIKVSEA QAKPPPIVKE GxLSWTFYDS KCPKIFNDDV GQAAGFRRLH FHACFVQGCD GSVLLDGLRS PNKFDNKYYL DLMNHQGLFT SDQDLYTDKR
TKDIVTNFAV NQSLFFEKFV AAMLKMGQLN VLTGTKGEIR ANCSVRNKGS KSFLTSAVEG FLEM

Retrieve as FASTA

Remarks

Pseudogene from genomic. No EST. Incorrect prediction from phytozome (SCADIL and VALS are missing; Same sequence found in a second contig (AC148397.13)).

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCTTATG CTTCTTGTAG GAGTGCTTTC TTCACCTTTC TTCTAATTCT TACCTTTCTT TCATTTTCCC ACATCAAAGT GTCTGAAGCA CAAGCCAAAC CTCCTCCTAT AGTTAAGGAA GGGAnnCTAT CATGGACCTT CTACGATTCA AAATGTCCTA AGCTTGAATC TATCATCAGA AAAGATCTTC AATGATGATG TTGGTCAAGC TGCTGGCTTT CGTCGCCTTC ACTTCCATGC CTGCTTTGTC CAGGTAAATA CATTTAATGT ATATTTAGCT TAATTAGTTA GGATCAGCTT ATACTATAAA CAATACTAAT TAAGCATTAC AATGCTTGTA ATTAGCATAT GTGGTGATTA AATTAGCTAA CTTTGGAAAT CCAAACTTAT TATATTTGGT TATTTATGGA TTAAAAAAAT GAAAATGCAG GGTTGTGATG GATCAGTATT ATTGGATGGA TCAGCAAGTG AGCCAAGTGA GAAAGATGCA CCACCAAACT TGAGTCTTAG GAAAGAGGCC TTCAAGATAA TCGAAAAACT TCGTAGTCCC AACAAATTTG ATAATAAATA CTACCTTGAT CTTATGAACC ATCAGGGTCT CTTTACTTCA GACCAAGATT TGTACACTGA TAAGAGGACT AAGGATATTG TTACTAACTT TGCTGTGAAT CAATCTTTGT TCTTTGAGAA ATTTGTTGCT GCTATGCTTA AAATGGGGCA
GCTTAATGTT TTGACTGGAA CTAAAGGAGA GATTCGAGCT AATTGCTCTG TTAGGAATAA GGGTAGCAAA TCATTTCTTA CTTCTGCTGT GGAAGGATTT TTAGAAATGT GA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA