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Entry information : MtPrx[P]69 ( Medtr1g098320.1 [4.0] / Medtr1g098320.1 [3.5] / Medtr1g124800.1 [3.0])
Entry ID 3579
Creation 2006-12-22 (Christophe Dunand)
Last sequence changes 2014-07-30 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Catherine Mathe
Last annotation changes 2016-04-12 (Catherine Mathe)
Peroxidase information: MtPrx[P]69 ( Medtr1g098320.1 [4.0] / Medtr1g098320.1 [3.5] / Medtr1g124800.1 [3.0])
Name (synonym) MtPrx[P]69 ( Medtr1g098320.1 [4.0] / Medtr1g098320.1 [3.5] / Medtr1g124800.1 [3.0])
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx[P]69
start..stop		 S start..stop
VaPrx01 166 5.74e-51 74..184 244..357
VaPrx01 101 3.85e-26 2..102 3..112
GmPrx314 164 3.16e-50 72..183 241..351
GmPrx314 110 1.69e-29 1..87 1..95
CaraPrx01 157 2.92e-49 74..179 105..208
GmPrx20 161 3.71e-49 72..183 241..351
GmPrx20 114 4.79e-31 1..87 1..95
Literature and cross-references MtPrx[P]69 ( Medtr1g098320.1 [4.0] / Medtr1g098320.1 [3.5] / Medtr1g124800.1 [3.0])
Literature Lin S., Dixon R., May G., Sumner L., Gonzales B., Cook D., Kim D., Roe B.A.; Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
DNA ref. Phytozome 12:   chr1 (44266112..44265285)
Cluster/Prediction ref. Phytozome Gene 12:   31092733
Omic ref. Gene atlas:   Mtr.49528.1.S1_at Legoo:   Mtr.49528.1.S1_at
Protein sequence: MtPrx[P]69 ( Medtr1g098320.1 [4.0] / Medtr1g098320.1 [3.5] / Medtr1g124800.1 [3.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   184 (154)
PWM (Da):   %s   20428.29 (17046.6)  
PI (pH):   %s   8.98 (8.93) Peptide Signal:   %s   cut: 33 range:31-184
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAYASCRSAF FTFLLILTFL SFSHIKVSEA QAKPPPIVKE GxLSWTFYDS KCPKIFNDDV GQAAGFRRLH FHACFVQGCD GSVLLDGLRS PNKFDNKYYL DLMNHQGLFT SDQDLYTDKR 
TKDIVTNFAV NQSLFFEKFV AAMLKMGQLN VLTGTKGEIR ANCSVRNKGS KSFLTSAVEG FLEM 

Retrieve as FASTA  
Remarks Pseudogene from genomic. No EST. Incorrect prediction from phytozome (SCADIL and VALS are missing; Same sequence found in a second contig (AC148397.13)).
DNA ►
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CDS►
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