Entry information : MtPrx38(Medtr4g095450.1[4.0] / Medtr4g095450.1[3.5] / Medtr8g099370.1[3.0])
Entry ID 363
Creation 2006-06-21 (Christophe Dunand)
Last sequence changes 2010-09-15 (Haythem Mhadhbi)
Sequence status complete
Reviewer Catherine
Last annotation changes 2022-03-25 (Catherine )
Peroxidase information: MtPrx38(Medtr4g095450.1[4.0] / Medtr4g095450.1[3.5] / Medtr8g099370.1[3.0])
Name MtPrx38(Medtr4g095450.1[4.0] / Medtr4g095450.1[3.5] / Medtr8g099370.1[3.0])
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue types Cell culture
Flowers
immature pod walls
Leaves
Root tips
Roots
Seedlings
Inducers beta glucan elicitor preparation from Phytophthora sojae
Colletotrichum inoculation
Glomus intraradices infection
Glomus versiforme infection
Insect damage (Spodoptera exigua, Meloidogyne, Aphib)
Meloidogyne incognita
Methyl jasmonate treatment
Pathogen interaction
Phoma infection
Phosphate starvation
Rhizobium inoculation
Sinorhizobium inoculation
Wounding
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx38
start..stop
S start..stop
MsPrx12 659 0 1..323 1..323
TrPrx02 614 0 1..323 1..329
GmPrx23 573 0 1..323 1..325
LjPrx04 556 0 1..323 1..322
Gene structure Fichier Exons


exon

Literature and cross-references MtPrx38(Medtr4g095450.1[4.0] / Medtr4g095450.1[3.5] / Medtr8g099370.1[3.0])
Literature REFERENCE 1. Harrison,M.J. et al., unpublished
REFERENCE 2. Manthey,K., Bartelsmeier,V., Baier,M.C., Meyer,F., Bartels,D., Bekel,T., Linke,B., Grunwald,U., Franken,P., Kuester,H., Perlick, A.M. and Puehler,A. Detection of transcript sequences from mycorrhizal roots of the model mycorrhiza Medicago truncatula genotype A17 - Glomus intraradices using the approach of an EST genome project. Unpublished (2002)
Protein ref. UniProtKB_Uniparc:   Q1SEC3
DNA ref. Phytozome 12:   chr4 (39800392..39803140)
Cluster/Prediction ref. Phytozome Gene 12:   31106365
Omic ref. Gene atlas:   Mtr.47795.1.S1_at Legoo:   Mtr.47795.1.S1_at
Protein sequence: MtPrx38(Medtr4g095450.1[4.0] / Medtr4g095450.1[3.5] / Medtr8g099370.1[3.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (298)
PWM (Da):   %s   35284.87 (32445.4) Transmb domain:   %s   i7-24o
PI (pH):   %s   9.13 (9.13) Peptide Signal:   %s   cut: 26 range:26-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGRYNVILVWSLALTLCLIPYTTFAQLSPNHYANICPNVQSIVRS
AVQKKFQQTFVTVPATLRLFFHDCFVQ
GCDASVLVASSGNNKAEKDHPENLSLAGDGFDTVIKAKAALDAVPQCRNKVSCADILALATRDVINLAGGPSYTVELGRFDGLVSRSSDVNGRLPQPSFNLNQLNTLFANNGLTQTDMIA
LS
GAHTLGFSHCDRFSNRIQTPVDPTLNKQYAAQLQQMCPRNVDPRIAINMDPTTPRTFDNVYYKNLQQGKGLFTSDQILFTDTRSRNTVNSFATNGNVFNANFITAMTKLGRVGVKNAR
NGKIRTDCSVL

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, 3 introns) and 44 ESTs.
DNA
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CDS
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cDNA
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