Entry information : HsGPx04-B
| Entry ID | 3632 |
|---|---|
| Creation | 2006-08-23 (Christophe Dunand) |
| Last sequence changes | 2016-06-28 (Harold Duruflé) |
| Sequence status | complete |
| Reviewer | Not yet reviewed |
| Last annotation changes | 2016-06-28 (Harold Duruflé) |
Peroxidase information: HsGPx04-B
| Name | HsGPx04-B | |||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class | Animal glutathione peroxidase [Orthogroup: Gpx1002] | |||||||||||||||||||||||||
| Taxonomy | Eukaryota Metazoa Chordata Mammalia Hominidae Homo | |||||||||||||||||||||||||
| Organism | Homo sapiens (human) [TaxId: 9606 ] | |||||||||||||||||||||||||
| Cellular localisation | N/D |
|||||||||||||||||||||||||
| Tissue type | N/D |
|||||||||||||||||||||||||
| Inducer | N/D |
|||||||||||||||||||||||||
| Repressor | N/D |
|||||||||||||||||||||||||
| Best BLASTp hits |
|
|||||||||||||||||||||||||
| Gene structure Fichier |
Exons►
|
Literature and cross-references HsGPx04-B
| Literature | Oh,J.H., Yang,J.O., Hahn,Y., Kim,M.R., Byun,S.S., Jeon,Y.J., Kim,J.M., Song,K.S., Noh,S.M., Kim,S., Yoo,H.S., Kim,Y.S. and Kim,N.S. Transcriptome analysis of human gastric cancer. Mamm. Genome 16 (12), 942-954 (2005) |
|---|---|
| Protein ref. | UniProtKB: P36969-2 |
| DNA ref. | GenBank: NC_000019.9 (1104043..1106636) |
| mRNA ref. | GenBank: NM_001039847 |
| Cluster/Prediction ref. | Genebank: 2879 |
Protein sequence: HsGPx04-B
| Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
| Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
| Remarks | Complete sequence from genomic (chromo 19, 6 introns). This variant (2) uses a frame-shifting alternate splice site in the 3' coding region, compared to variant 1. The encoded isoform (B) is longer and has a distinct C-terminus, compared to isoform A | ||||||||||||
| Promoter► Send to BLAST Send to cis Analysis |
|||||||||||||
| Terminator +► Send to BLAST Send to cis Analysis |
|||||||||||||
| DNA ► Send to BLAST |
|||||||||||||
| CDS► Send to BLAST |
|||||||||||||
