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Entry information : GtAPx01
Entry ID 3674
Creation 2006-08-24 (Christophe Dunand)
Last sequence changes 2015-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-11 (Achraf Jemmat)
Peroxidase information: GtAPx01
Name GtAPx01
Class Ascorbate peroxidase     [Orthogroup: APx002]*
Taxonomy Eukaryota Cryptophyta Geminigeraceae Guillardia
Organism Guillardia theta    [TaxId: 55529 ]
Cellular localisation Thylakoid-bound
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GtAPx01
start..stop		 S start..stop
GtAPx02 472 1.66e-168 39..336 51..349
PtrAPx01 429 3.52e-152 41..336 25..320
TpsAPx02 408 6.42e-144 24..336 17..319
TocAPx01 379 1.48e-132 57..336 17..298
Literature and cross-references GtAPx01
Literature Patron,N.J. et al., Comparative rates of evolution in endosymbiotic nuclear genomes. BMC Evol. Biol. 6, 46 (2006)
Protein ref. GenBank:   EKX34249.1 [5' end]  ABD51921.1 [3' end] UniProtKB:   Q15GE7 [3' end]
DNA ref. JGI genome:   scaffold_151 (136181..136894) [5' end]
mRNA ref. GenBank:   EG729268.1 [3' end]
EST ref. GenBank:   HE988363.1 [5' end]
Cluster/Prediction ref. JGI gene:   147367 [5' end]
Protein sequence: GtAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336
PWM (Da):   %s   35781.07  
PI (pH):   %s   9.42
Sequence
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Send to Peroxiscan
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MAFEVPSSTL LLSSRAPGLC QGRFTRPMAV KRAGVRAGRS GVVRGMTMTT VEEKTKQLVG AKAALKELID QTNANPIMVR LAWHDSGTYD DSIKTFPKAG GATGSIRFDP EIHHGANAGL  TNAVKMLEPI KQQFPAVSYA DLFQMASAVS IELAGGPKIP MRYGRVDAAG PRDCSPEGNL PDAEAGPSGK FGGKGGTAST EDSTAAGHLR KVFYRMGLGD EEIVALSGAH TIGRAYKDRS 
GLGKEVTKYT DGSKIVRADG KAGSGKAGGS SWTEKWLTFD NSYFTTIPDP NADPELLKLT SDRTLFEDPG FKPFAEKFRD SNEAFFQSYA KAHARL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (5'part), mRNA (3'part) and 8 ESTs.
DNA ►
Send to BLAST
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ATGGCGTTCG AGGTCCCTTC CTCCACCCTG CTCCTCTCTA GCAGAGCTCC AGGACTCTGC CAGGGAAGGT TCACCCGCCC CATGGCTGTG AAGAGAGCTG GTGTTCGTGC TGGGAGAAGC  GGAGTCGTCC GTGGCATGAC CATGACGACG GTGGAAGAGA AGACGAAGCA GCTTGTGGGA GCGAAGGCGG CGCTGAAGGA GCTCATCGAT CAGACCAATG CAAACCCAAT CATGGTGAGA  GGAGGAAACA CCATAGCAAG GTGCAGGGGA GGTGTGGAGT CGAGGTTGGG AGGATTGGGC GTGAAGGGTC GGAGCTGTAA GAGTTGTGAA ACCCTGAGAA GTGAAGCATG TCGTAGCACA  TGCGATGAGT TGCTCTGATC TTGATTCCAC CTTGTTAACA TTTTCCTGTT GAGCTTCCTC CCATTTCCAG CACTATCCTC TCTCCCTCCT CCGTATCCTG CCCCTTTCCT CGCAGTACCT  GTAAACCAGA GGGAATCATT ACGTTCTCTT CCTCCTCTCG ACCTCTGAAG GACAGCCATG CTGCAGGTTC GTCTCGCCTG GCATGACTCT GGTACCTACG ACGACAGCAT CAAGACTTTC 
CCCAAGGCTG GCGGCGCCAC CGGCTCCATC CGCTTCGATC CCGAGATCCA CCATGGCGCC AACGCTGGTC TGACCAACGC CGTCAAGATG CTGGAGCCTA TCAAGCAGCA GTAA 

Retrieve as FASTA  
CDS►
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ATGGCGTTCG AGGTCCCTTC CTCCACCCTG CTCCTCTCTA GCAGAGCTCC AGGACTCTGC CAGGGAAGGT TCACCCGCCC CATGGCTGTG AAGAGAGCTG GTGTTCGTGC TGGGAGAAGC  GGAGTCGTCC GTGGCATGAC CATGACGACG GTGGAAGAGA AGACGAAGCA GCTTGTGGGA GCGAAGGCGG CGCTGAAGGA GCTCATCGAT CAGACCAATG CAAACCCAAT CATGGTTCGT  CTCGCCTGGC ATGACTCTGG TACCTACGAC GACAGCATCA AGACTTTCCC CAAGGCTGGC GGCGCCACCG GCTCCATCCG CTTCGATCCC GAGATCCACC ATGGCGCCAA CGCTGGTCTG  ACCAACGCCG TCAAGATGCT GGAGCCTATC AAGCAGCAGT TCCCAGCTGT CTCCTATGCC GACTTGTTCC AGATGGCTTC TGCCGTCTCC ATCGAACTTG CTGGCGGGCC CAAGATCCCT  ATGAGGTATG GACGTGTTGA CGCCGCTGGC CCTCGCGACT GCTCCCCTGA GGGAAACCTC CCTGACGCTG AGGCTGGTCC ATCTGGAAAG TTCGGAGGCA AGGGTGGAAC TGCCTCTACT  GAGGATTCCA CTGCTGCTGG ACATCTGCGC AAGGTGTTCT ACAGGATGGG TCTTGGAGAC GAGGAGATCG TTGCTCTCTC TGGCGCCCAC ACCATCGGAC GTGCGTACAA GGACCGCTCT  GGGCTCGGCA AGGAAGTCAC CAAGTACACT GATGGAAGCA AGATTGTCCG TGCGGATGGC AAGGCTGGAT CTGGCAAAGC TGGAGGATCT TCCTGGACCG AGAAGTGGTT GACTTTCGAC  AACAGCTACT TCACCACCAT CCCAGACCCC AACGCTGACC CCGAGCTCCT CAAGCTCACC TCGGACAGAA CTCTCTTCGA AGATCCTGGC TTCAAGCCCT TTGCTGAGAA GTTCCGTGAC 
AGCAACGAAG CTTTCTTCCA GTCCTATGCT AAGGCTCACG CCAGACTG 

Retrieve as FASTA